Top 10 genes with highest correlation to Rv3294c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0144/- | (cc=0.5785) | info on Rv0144/- |
| Rv1989c/- | (cc=0.5534) | info on Rv1989c/- |
| Rv1882c/- | (cc=0.5444) | info on Rv1882c/- |
| Rv0764c/cyp51 | (cc=0.5366) | info on Rv0764c/cyp51 |
| Rv2066/cobI | (cc=0.5356) | info on Rv2066/cobI |
| Rv2025c/- | (cc=0.5326) | info on Rv2025c/- |
| Rv0233/nrdB | (cc=0.5247) | info on Rv0233/nrdB |
| Rv3435c/- | (cc=0.5243) | info on Rv3435c/- |
| Rv3554/fdxB | (cc=0.5217) | info on Rv3554/fdxB |
| Rv0560c/- | (cc=0.5215) | info on Rv0560c/- |
Correlation of Rv3294c/- with Rv0233/nrdB
Normalized LFCs for Rv3294c/-:
(description and provenance of datasets)
| Rv3294c/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | 0.213 | 0.2 |
| low_pH_jason_reseq | 0.11 | -0.095 |
| NO_jason_reseq | -0.446 | -0.131 |
| B6_jason_reseq | 0.424 | 0.854 |
| MHCII_jason_reseq | 0.795 | 1.421 |
| Isoniazid02 | -0.179 | 0.322 |
| Rifampicin4 | -0.366 | -0.192 |
| Ethambutol3 | -0.288 | 0.154 |
| Meropenem3 | 0.437 | 0.291 |
| Vancomycin16 | -0.424 | -0.443 |
| Rv2680_day32 | -0.202 | 0.614 |
| H37Rv_KO_MarP | -0.038 | 0.167 |
| hypoxia_3wks | -0.024 | -0.159 |
| hypoxia_6wks | -0.111 | 0.192 |
| glycerol | -0.984 | -0.973 |
| cholesterol | -0.209 | -0.39 |
| AJ | 0.21 | 0.316 |
| Bibs02 | 0.454 | 0.891 |
| Bibs02c | 0.409 | 0.543 |
| BL6 | -0.772 | -1.416 |
| BL6a | -0.043 | -0.575 |
| BXD01 | -0.343 | -0.696 |
| BXD010 | -0.437 | -0.537 |
| BXD011 | -0.255 | -0.693 |
| BXD03 | -0.189 | -1.509 |
| BXD04 | -0.506 | -0.539 |
| BXD05 | -0.128 | -0.41 |
| BXD06 | -0.416 | -0.887 |
| BXD07 | -0.538 | -1.157 |
| BXD08 | -0.209 | -0.354 |
| BXD09 | -0.162 | -0.919 |
| CAST | 0.307 | -0.038 |
| CCcont | -0.627 | -1.564 |
| DS01 | 0.33 | 1.025 |
| DS02 | 0.457 | 0.748 |
| DS04 | 0.156 | 0.933 |
| DS0c | 1.004 | 0.548 |
| GP01 | 0.775 | -0.911 |
| GP02 | 0.497 | -0.359 |
| GP0c | 0.144 | -0.382 |
| NOD | 0.955 | 0.605 |
| NZO | 0.507 | 0.12 |
| PWK | 0.453 | -0.242 |
| H37Rv_KO_CtpC | -0.154 | -1.19 |
| H37Rv_KO_CtpD | 0.076 | -0.803 |
| H37Rv_KO_Rv1272 | 0.663 | -0.626 |
| H37Rv_KO_SugABC | -0.138 | -0.316 |
| H37Rv_KO_MbtN | 0.211 | -0.755 |
| Trans05 | 0.207 | -0.13 |
| macrophage_unactivated | -0.3 | -1.083 |
| IL1 | 0.163 | -0.193 |
| Rapamycin | -0.064 | -0.786 |
| Tcell | -0.212 | -0.046 |
| GMCSF | -0.037 | 0.459 |
| IFNab | -0.172 | -0.478 |
| IFNg | -0.374 | 0.38 |
| IFNg_GMCSF1 | 0.421 | -0.396 |
| Rv1432_day32 | 0.595 | 0.042 |
| Rv1565c_day32 | 0.24 | 0.963 |
| secA2_input | -0.538 | 0.106 |
| delta_Rv3594 | 0.07 | -0.399 |
| delta_Rv3717 | 0.185 | -0.766 |
| delta_Rv3811 | -0.024 | -0.589 |
| delta_Rv0954 | 0.243 | -0.252 |
| PonA1 | 0.248 | -0.066 |
| EccD1_KO | -0.214 | -0.286 |
| EspI_KO | -0.319 | -0.368 |
| PE35_KO | -0.426 | -1.041 |
| PPE68_KO | -0.653 | -0.483 |
| glycerol2 | 0.321 | -0.911 |
| lignocerate | 0.1 | -0.609 |
| oleate | 0.077 | -0.404 |
| phosphatidylcholine | 0.35 | -0.598 |
| acetate | -0.166 | -1.107 |
| glucAc | -0.252 | -1.029 |
| Rv0950ko | 0.513 | 0.308 |
| Rv1096ko | 0.531 | 0.805 |
| Rv3684ko | 0.537 | 0.259 |
| delta_otsA_trehalose | 1.61 | 0.437 |