Top 10 genes with highest correlation to Rv3272/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3273/- | (cc=0.6682) | info on Rv3273/- |
| Rv2620c/- | (cc=0.5035) | info on Rv2620c/- |
| Rv1809/PPE33 | (cc=0.4931) | info on Rv1809/PPE33 |
| Rv1808/PPE32 | (cc=0.4802) | info on Rv1808/PPE32 |
| Rv1405c/- | (cc=0.4785) | info on Rv1405c/- |
| Rv2851c/- | (cc=0.4743) | info on Rv2851c/- |
| Rv3535c/hsaG | (cc=0.4618) | info on Rv3535c/hsaG |
| Rv1590/- | (cc=0.4505) | info on Rv1590/- |
| Rv0485/- | (cc=0.45) | info on Rv0485/- |
| Rv2475c/- | (cc=0.4499) | info on Rv2475c/- |
Correlation of Rv3272/- with Rv2475c/-
Normalized LFCs for Rv3272/-:
(description and provenance of datasets)
| Rv3272/- | Rv2475c/- | |
| Fe_supp_jason_reseq | -1.133 | -0.982 |
| low_pH_jason_reseq | -1.787 | 0.283 |
| NO_jason_reseq | -1.864 | -5.224 |
| B6_jason_reseq | -1.082 | -3.595 |
| MHCII_jason_reseq | -0.511 | -1.986 |
| Isoniazid02 | 0.821 | -0.611 |
| Rifampicin4 | -0.707 | -0.707 |
| Ethambutol3 | -0.535 | -1.53 |
| Meropenem3 | 0.107 | -2.11 |
| Vancomycin16 | -0.464 | -0.743 |
| Rv2680_day32 | -0.522 | -3.788 |
| H37Rv_KO_MarP | 0.305 | 0.442 |
| hypoxia_3wks | 0.829 | 0.335 |
| hypoxia_6wks | 0.737 | -0.382 |
| glycerol | -1.456 | -2.036 |
| cholesterol | -0.577 | -0.89 |
| AJ | -1.331 | -2.588 |
| Bibs02 | -0.848 | -0.715 |
| Bibs02c | 0.3 | -2.236 |
| BL6 | 0.749 | -0.885 |
| BL6a | -0.442 | -1.832 |
| BXD01 | -0.519 | -0.607 |
| BXD010 | -0.105 | -0.688 |
| BXD011 | -0.623 | -1.797 |
| BXD03 | -0.066 | -1.197 |
| BXD04 | -0.39 | 0.047 |
| BXD05 | -0.727 | -1.545 |
| BXD06 | -0.081 | -1.386 |
| BXD07 | -0.73 | -0.921 |
| BXD08 | -0.499 | -1.794 |
| BXD09 | -0.413 | -1.281 |
| CAST | -1.026 | -1.758 |
| CCcont | -0.312 | 0.752 |
| DS01 | -0.517 | -2.152 |
| DS02 | 0.134 | -1.763 |
| DS04 | 0.332 | -2.195 |
| DS0c | -0.79 | -2.065 |
| GP01 | -0.004 | -0.732 |
| GP02 | -0.682 | -1.911 |
| GP0c | -1.11 | -1.151 |
| NOD | -0.818 | -3.267 |
| NZO | -1.315 | -2.323 |
| PWK | -1.54 | -1.867 |
| H37Rv_KO_CtpC | 0.571 | -1.736 |
| H37Rv_KO_CtpD | -0.974 | -1.012 |
| H37Rv_KO_Rv1272 | -0.122 | -0.998 |
| H37Rv_KO_SugABC | -1.19 | -1.485 |
| H37Rv_KO_MbtN | -0.393 | 1.143 |
| Trans05 | -0.135 | -1.762 |
| macrophage_unactivated | 0.0 | 0.36 |
| IL1 | 0.706 | -0.489 |
| Rapamycin | 1.083 | 0.497 |
| Tcell | -0.078 | -0.733 |
| GMCSF | 0.061 | -1.927 |
| IFNab | 0.0 | 0.067 |
| IFNg | 0.706 | -2.403 |
| IFNg_GMCSF1 | 0.534 | -1.678 |
| Rv1432_day32 | -0.309 | -3.601 |
| Rv1565c_day32 | -2.213 | -1.148 |
| secA2_input | -0.717 | 1.331 |
| delta_Rv3594 | -0.078 | 0.054 |
| delta_Rv3717 | 0.081 | -0.497 |
| delta_Rv3811 | 0.0 | -0.345 |
| delta_Rv0954 | 0.482 | 0.176 |
| PonA1 | -0.31 | 1.432 |
| EccD1_KO | 0.349 | -0.151 |
| EspI_KO | 0.428 | 1.027 |
| PE35_KO | -0.286 | 0.683 |
| PPE68_KO | -0.128 | 0.918 |
| glycerol2 | 1.75 | 1.014 |
| lignocerate | 0.118 | 1.396 |
| oleate | -0.998 | -0.194 |
| phosphatidylcholine | 1.45 | 1.217 |
| acetate | 0.587 | 1.019 |
| glucAc | 0.529 | 0.892 |
| Rv0950ko | -0.084 | 0.799 |
| Rv1096ko | 0.398 | 0.872 |
| Rv3684ko | 0.029 | 1.32 |
| delta_otsA_trehalose | 0.9 | 0.871 |