Top 10 genes with highest correlation to Rv3253c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2127/ansP1 | (cc=0.5429) | info on Rv2127/ansP1 |
| Rv0346c/ansP2 | (cc=0.5323) | info on Rv0346c/ansP2 |
| Rv3492c/- | (cc=0.5182) | info on Rv3492c/- |
| Rv1790/PPE27 | (cc=0.5166) | info on Rv1790/PPE27 |
| Rv3500c/yrbE4B | (cc=0.5156) | info on Rv3500c/yrbE4B |
| Rv0693/pqqE | (cc=0.4756) | info on Rv0693/pqqE |
| Rv3497c/mce4C | (cc=0.4423) | info on Rv3497c/mce4C |
| Rv1785c/cyp143 | (cc=0.439) | info on Rv1785c/cyp143 |
| Rv3501c/yrbE4A | (cc=0.4383) | info on Rv3501c/yrbE4A |
| Rv0390/- | (cc=0.4341) | info on Rv0390/- |
Correlation of Rv3253c/- with Rv0693/pqqE
Normalized LFCs for Rv3253c/-:
(description and provenance of datasets)
| Rv3253c/- | Rv0693/pqqE | |
| Fe_supp_jason_reseq | -0.532 | -0.884 |
| low_pH_jason_reseq | -0.007 | -0.668 |
| NO_jason_reseq | -0.554 | -0.27 |
| B6_jason_reseq | -0.696 | -0.952 |
| MHCII_jason_reseq | -0.67 | -0.809 |
| Isoniazid02 | 0.924 | 0.172 |
| Rifampicin4 | 0.065 | 0.0 |
| Ethambutol3 | 0.777 | 0.925 |
| Meropenem3 | 0.058 | 0.728 |
| Vancomycin16 | 0.236 | 0.093 |
| Rv2680_day32 | -0.311 | -1.501 |
| H37Rv_KO_MarP | 0.27 | 0.306 |
| hypoxia_3wks | -0.415 | 0.163 |
| hypoxia_6wks | 0.305 | 1.178 |
| glycerol | -1.621 | -0.275 |
| cholesterol | -2.283 | -2.261 |
| AJ | -0.993 | -0.617 |
| Bibs02 | -0.468 | -1.003 |
| Bibs02c | -0.708 | -0.285 |
| BL6 | 0.201 | -0.779 |
| BL6a | -0.575 | 0.521 |
| BXD01 | -0.602 | -0.177 |
| BXD010 | 0.166 | 0.08 |
| BXD011 | -0.029 | 0.436 |
| BXD03 | 0.0 | 0.214 |
| BXD04 | -0.275 | -0.511 |
| BXD05 | 0.247 | 0.482 |
| BXD06 | -0.137 | 0.259 |
| BXD07 | -0.362 | 0.34 |
| BXD08 | -0.466 | 0.92 |
| BXD09 | -0.193 | 0.72 |
| CAST | 0.197 | -0.809 |
| CCcont | -0.533 | 0.765 |
| DS01 | -0.551 | -1.867 |
| DS02 | -0.846 | -1.355 |
| DS04 | -0.097 | 0.197 |
| DS0c | -0.655 | -0.349 |
| GP01 | -0.831 | 0.736 |
| GP02 | 0.451 | -0.134 |
| GP0c | -0.018 | 0.942 |
| NOD | -0.6 | -1.076 |
| NZO | -0.978 | -1.403 |
| PWK | 0.445 | 0.516 |
| H37Rv_KO_CtpC | 0.339 | -0.724 |
| H37Rv_KO_CtpD | -0.705 | 0.2 |
| H37Rv_KO_Rv1272 | 0.138 | 0.0 |
| H37Rv_KO_SugABC | 0.573 | 0.21 |
| H37Rv_KO_MbtN | 0.438 | 0.541 |
| Trans05 | 0.809 | 1.707 |
| macrophage_unactivated | -0.136 | -1.42 |
| IL1 | 0.122 | 1.278 |
| Rapamycin | -0.175 | 0.924 |
| Tcell | 0.046 | -0.303 |
| GMCSF | -0.169 | -0.792 |
| IFNab | -0.493 | -0.583 |
| IFNg | -0.019 | -0.845 |
| IFNg_GMCSF1 | 0.949 | -0.424 |
| Rv1432_day32 | -0.631 | -0.746 |
| Rv1565c_day32 | -0.965 | 0.741 |
| secA2_input | 0.654 | 0.617 |
| delta_Rv3594 | -0.802 | -0.174 |
| delta_Rv3717 | -0.454 | -0.143 |
| delta_Rv3811 | -0.865 | -0.229 |
| delta_Rv0954 | -0.593 | -0.199 |
| PonA1 | -0.351 | -0.249 |
| EccD1_KO | 0.118 | 0.72 |
| EspI_KO | 0.123 | 0.625 |
| PE35_KO | -0.353 | 0.184 |
| PPE68_KO | -0.755 | 0.522 |
| glycerol2 | 0.68 | 2.306 |
| lignocerate | -0.677 | 0.281 |
| oleate | 0.788 | 0.8 |
| phosphatidylcholine | -0.062 | 1.356 |
| acetate | -0.199 | 0.791 |
| glucAc | -0.124 | 1.188 |
| Rv0950ko | 0.648 | -0.124 |
| Rv1096ko | 0.805 | 0.935 |
| Rv3684ko | 0.229 | 0.96 |
| delta_otsA_trehalose | 0.269 | 0.044 |