Top 10 genes with highest correlation to Rv3253c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2127/ansP1 | (cc=0.5429) | info on Rv2127/ansP1 |
| Rv0346c/ansP2 | (cc=0.5323) | info on Rv0346c/ansP2 |
| Rv3492c/- | (cc=0.5182) | info on Rv3492c/- |
| Rv1790/PPE27 | (cc=0.5166) | info on Rv1790/PPE27 |
| Rv3500c/yrbE4B | (cc=0.5156) | info on Rv3500c/yrbE4B |
| Rv0693/pqqE | (cc=0.4756) | info on Rv0693/pqqE |
| Rv3497c/mce4C | (cc=0.4423) | info on Rv3497c/mce4C |
| Rv1785c/cyp143 | (cc=0.439) | info on Rv1785c/cyp143 |
| Rv3501c/yrbE4A | (cc=0.4383) | info on Rv3501c/yrbE4A |
| Rv0390/- | (cc=0.4341) | info on Rv0390/- |
Correlation of Rv3253c/- with Rv0346c/ansP2
Normalized LFCs for Rv3253c/-:
(description and provenance of datasets)
| Rv3253c/- | Rv0346c/ansP2 | |
| Fe_supp_jason_reseq | -0.532 | -2.144 |
| low_pH_jason_reseq | -0.007 | -1.241 |
| NO_jason_reseq | -0.554 | -1.045 |
| B6_jason_reseq | -0.696 | -1.311 |
| MHCII_jason_reseq | -0.67 | -1.572 |
| Isoniazid02 | 0.924 | -1.132 |
| Rifampicin4 | 0.065 | 1.335 |
| Ethambutol3 | 0.777 | 1.181 |
| Meropenem3 | 0.058 | 0.052 |
| Vancomycin16 | 0.236 | -0.093 |
| Rv2680_day32 | -0.311 | 0.412 |
| H37Rv_KO_MarP | 0.27 | -0.648 |
| hypoxia_3wks | -0.415 | -0.614 |
| hypoxia_6wks | 0.305 | 1.662 |
| glycerol | -1.621 | -5.051 |
| cholesterol | -2.283 | -4.096 |
| AJ | -0.993 | -0.45 |
| Bibs02 | -0.468 | -0.146 |
| Bibs02c | -0.708 | -0.627 |
| BL6 | 0.201 | -0.755 |
| BL6a | -0.575 | -0.418 |
| BXD01 | -0.602 | -0.141 |
| BXD010 | 0.166 | 0.227 |
| BXD011 | -0.029 | 0.113 |
| BXD03 | 0.0 | 0.421 |
| BXD04 | -0.275 | 0.37 |
| BXD05 | 0.247 | 0.525 |
| BXD06 | -0.137 | 0.545 |
| BXD07 | -0.362 | 0.025 |
| BXD08 | -0.466 | -0.307 |
| BXD09 | -0.193 | -0.119 |
| CAST | 0.197 | 0.195 |
| CCcont | -0.533 | -0.805 |
| DS01 | -0.551 | -0.438 |
| DS02 | -0.846 | -0.939 |
| DS04 | -0.097 | 0.818 |
| DS0c | -0.655 | -0.677 |
| GP01 | -0.831 | -0.042 |
| GP02 | 0.451 | -0.829 |
| GP0c | -0.018 | -0.486 |
| NOD | -0.6 | -0.368 |
| NZO | -0.978 | -0.019 |
| PWK | 0.445 | 1.262 |
| H37Rv_KO_CtpC | 0.339 | -0.565 |
| H37Rv_KO_CtpD | -0.705 | -0.267 |
| H37Rv_KO_Rv1272 | 0.138 | -0.8 |
| H37Rv_KO_SugABC | 0.573 | -0.993 |
| H37Rv_KO_MbtN | 0.438 | 0.546 |
| Trans05 | 0.809 | -0.228 |
| macrophage_unactivated | -0.136 | -0.221 |
| IL1 | 0.122 | 0.095 |
| Rapamycin | -0.175 | -0.071 |
| Tcell | 0.046 | 0.951 |
| GMCSF | -0.169 | 0.639 |
| IFNab | -0.493 | -0.541 |
| IFNg | -0.019 | 0.337 |
| IFNg_GMCSF1 | 0.949 | 0.537 |
| Rv1432_day32 | -0.631 | 1.107 |
| Rv1565c_day32 | -0.965 | -1.156 |
| secA2_input | 0.654 | -0.54 |
| delta_Rv3594 | -0.802 | 0.809 |
| delta_Rv3717 | -0.454 | 0.938 |
| delta_Rv3811 | -0.865 | 0.828 |
| delta_Rv0954 | -0.593 | 0.061 |
| PonA1 | -0.351 | 0.381 |
| EccD1_KO | 0.118 | -0.187 |
| EspI_KO | 0.123 | -0.374 |
| PE35_KO | -0.353 | -1.059 |
| PPE68_KO | -0.755 | -0.723 |
| glycerol2 | 0.68 | 1.225 |
| lignocerate | -0.677 | -0.153 |
| oleate | 0.788 | 2.562 |
| phosphatidylcholine | -0.062 | 0.0 |
| acetate | -0.199 | 0.369 |
| glucAc | -0.124 | 0.685 |
| Rv0950ko | 0.648 | 0.353 |
| Rv1096ko | 0.805 | 0.437 |
| Rv3684ko | 0.229 | 0.242 |
| delta_otsA_trehalose | 0.269 | 0.449 |