Top 10 genes with highest correlation to Rv3253c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2127/ansP1 | (cc=0.5429) | info on Rv2127/ansP1 |
| Rv0346c/ansP2 | (cc=0.5323) | info on Rv0346c/ansP2 |
| Rv3492c/- | (cc=0.5182) | info on Rv3492c/- |
| Rv1790/PPE27 | (cc=0.5166) | info on Rv1790/PPE27 |
| Rv3500c/yrbE4B | (cc=0.5156) | info on Rv3500c/yrbE4B |
| Rv0693/pqqE | (cc=0.4756) | info on Rv0693/pqqE |
| Rv3497c/mce4C | (cc=0.4423) | info on Rv3497c/mce4C |
| Rv1785c/cyp143 | (cc=0.439) | info on Rv1785c/cyp143 |
| Rv3501c/yrbE4A | (cc=0.4383) | info on Rv3501c/yrbE4A |
| Rv0390/- | (cc=0.4341) | info on Rv0390/- |
Correlation of Rv3253c/- with Rv2127/ansP1
Normalized LFCs for Rv3253c/-:
(description and provenance of datasets)
| Rv3253c/- | Rv2127/ansP1 | |
| Fe_supp_jason_reseq | -0.532 | -0.684 |
| low_pH_jason_reseq | -0.007 | -1.111 |
| NO_jason_reseq | -0.554 | -3.232 |
| B6_jason_reseq | -0.696 | -1.886 |
| MHCII_jason_reseq | -0.67 | -1.539 |
| Isoniazid02 | 0.924 | 0.116 |
| Rifampicin4 | 0.065 | 0.0 |
| Ethambutol3 | 0.777 | 1.294 |
| Meropenem3 | 0.058 | 0.472 |
| Vancomycin16 | 0.236 | 0.037 |
| Rv2680_day32 | -0.311 | 0.387 |
| H37Rv_KO_MarP | 0.27 | 0.054 |
| hypoxia_3wks | -0.415 | -1.264 |
| hypoxia_6wks | 0.305 | -0.472 |
| glycerol | -1.621 | -2.667 |
| cholesterol | -2.283 | -1.656 |
| AJ | -0.993 | -1.235 |
| Bibs02 | -0.468 | -0.494 |
| Bibs02c | -0.708 | -0.5 |
| BL6 | 0.201 | -1.027 |
| BL6a | -0.575 | -0.794 |
| BXD01 | -0.602 | -1.055 |
| BXD010 | 0.166 | -0.676 |
| BXD011 | -0.029 | -0.602 |
| BXD03 | 0.0 | -0.512 |
| BXD04 | -0.275 | -0.421 |
| BXD05 | 0.247 | -0.614 |
| BXD06 | -0.137 | -0.856 |
| BXD07 | -0.362 | -1.175 |
| BXD08 | -0.466 | -1.269 |
| BXD09 | -0.193 | -1.123 |
| CAST | 0.197 | -0.848 |
| CCcont | -0.533 | -0.801 |
| DS01 | -0.551 | -0.82 |
| DS02 | -0.846 | -1.364 |
| DS04 | -0.097 | 0.052 |
| DS0c | -0.655 | -1.032 |
| GP01 | -0.831 | -0.451 |
| GP02 | 0.451 | -0.564 |
| GP0c | -0.018 | -0.209 |
| NOD | -0.6 | -0.607 |
| NZO | -0.978 | -0.799 |
| PWK | 0.445 | 0.182 |
| H37Rv_KO_CtpC | 0.339 | 0.048 |
| H37Rv_KO_CtpD | -0.705 | -0.603 |
| H37Rv_KO_Rv1272 | 0.138 | 0.072 |
| H37Rv_KO_SugABC | 0.573 | 0.269 |
| H37Rv_KO_MbtN | 0.438 | -0.154 |
| Trans05 | 0.809 | -0.091 |
| macrophage_unactivated | -0.136 | -0.18 |
| IL1 | 0.122 | 0.644 |
| Rapamycin | -0.175 | 0.242 |
| Tcell | 0.046 | -0.065 |
| GMCSF | -0.169 | 0.56 |
| IFNab | -0.493 | -0.045 |
| IFNg | -0.019 | -0.371 |
| IFNg_GMCSF1 | 0.949 | -0.314 |
| Rv1432_day32 | -0.631 | 0.402 |
| Rv1565c_day32 | -0.965 | -0.398 |
| secA2_input | 0.654 | -0.684 |
| delta_Rv3594 | -0.802 | -0.301 |
| delta_Rv3717 | -0.454 | 0.052 |
| delta_Rv3811 | -0.865 | -0.519 |
| delta_Rv0954 | -0.593 | 0.043 |
| PonA1 | -0.351 | -0.649 |
| EccD1_KO | 0.118 | -0.451 |
| EspI_KO | 0.123 | -0.291 |
| PE35_KO | -0.353 | -0.21 |
| PPE68_KO | -0.755 | -0.573 |
| glycerol2 | 0.68 | 1.76 |
| lignocerate | -0.677 | -0.207 |
| oleate | 0.788 | 1.733 |
| phosphatidylcholine | -0.062 | -0.115 |
| acetate | -0.199 | 0.253 |
| glucAc | -0.124 | 0.0 |
| Rv0950ko | 0.648 | 0.434 |
| Rv1096ko | 0.805 | -0.799 |
| Rv3684ko | 0.229 | -0.58 |
| delta_otsA_trehalose | 0.269 | -0.662 |