Top 10 genes with highest correlation to Rv3234c/tgs3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1425/- | (cc=0.4644) | info on Rv1425/- |
| Rv1249c/- | (cc=0.4583) | info on Rv1249c/- |
| Rv2405/- | (cc=0.449) | info on Rv2405/- |
| Rv0869c/moaA2 | (cc=0.4471) | info on Rv0869c/moaA2 |
| Rv3390/lpqD | (cc=0.4406) | info on Rv3390/lpqD |
| Rv1927/- | (cc=0.4393) | info on Rv1927/- |
| Rv0261c/narK3 | (cc=0.4387) | info on Rv0261c/narK3 |
| Rv3440c/- | (cc=0.4375) | info on Rv3440c/- |
| Rv0264c/- | (cc=0.4347) | info on Rv0264c/- |
| Rv2579/dhaA | (cc=0.4318) | info on Rv2579/dhaA |
Correlation of Rv3234c/tgs3 with Rv0261c/narK3
Normalized LFCs for Rv3234c/tgs3:
(description and provenance of datasets)
| Rv3234c/tgs3 | Rv0261c/narK3 | |
| Fe_supp_jason_reseq | -0.328 | -1.435 |
| low_pH_jason_reseq | -0.397 | 0.273 |
| NO_jason_reseq | -0.326 | -0.213 |
| B6_jason_reseq | 0.0 | -0.184 |
| MHCII_jason_reseq | 0.148 | 0.374 |
| Isoniazid02 | -0.314 | 0.406 |
| Rifampicin4 | 0.403 | -0.623 |
| Ethambutol3 | 0.531 | -0.058 |
| Meropenem3 | 1.152 | 0.0 |
| Vancomycin16 | 0.215 | 0.358 |
| Rv2680_day32 | 0.77 | -0.267 |
| H37Rv_KO_MarP | 0.034 | 0.0 |
| hypoxia_3wks | 0.0 | -0.574 |
| hypoxia_6wks | 0.516 | -0.186 |
| glycerol | -0.255 | -0.551 |
| cholesterol | 0.093 | -0.246 |
| AJ | 0.166 | -0.899 |
| Bibs02 | -0.581 | 0.736 |
| Bibs02c | 0.383 | -0.781 |
| BL6 | -0.009 | 0.039 |
| BL6a | 0.356 | -0.957 |
| BXD01 | -0.231 | -0.159 |
| BXD010 | 0.009 | -0.458 |
| BXD011 | -0.221 | -0.233 |
| BXD03 | -0.216 | -0.722 |
| BXD04 | -0.085 | 0.225 |
| BXD05 | -0.414 | -0.65 |
| BXD06 | -0.081 | -0.147 |
| BXD07 | -0.01 | -0.219 |
| BXD08 | 0.005 | 0.526 |
| BXD09 | 0.244 | -0.205 |
| CAST | 0.157 | 0.072 |
| CCcont | -0.045 | -0.147 |
| DS01 | 0.043 | 0.098 |
| DS02 | 0.309 | -0.14 |
| DS04 | -0.134 | 0.06 |
| DS0c | -0.159 | -0.214 |
| GP01 | -0.856 | 0.0 |
| GP02 | 1.097 | 0.567 |
| GP0c | -0.148 | -0.409 |
| NOD | 0.145 | -0.553 |
| NZO | -0.21 | -0.6 |
| PWK | 0.092 | 0.215 |
| H37Rv_KO_CtpC | 0.111 | 0.131 |
| H37Rv_KO_CtpD | -0.899 | -1.086 |
| H37Rv_KO_Rv1272 | 0.669 | 0.398 |
| H37Rv_KO_SugABC | 0.014 | 0.041 |
| H37Rv_KO_MbtN | 0.16 | -0.836 |
| Trans05 | 0.084 | 0.359 |
| macrophage_unactivated | 0.366 | 0.129 |
| IL1 | 0.543 | -0.19 |
| Rapamycin | 0.341 | -0.62 |
| Tcell | 0.235 | 0.199 |
| GMCSF | -0.304 | -0.795 |
| IFNab | 0.336 | -0.611 |
| IFNg | 0.166 | 0.714 |
| IFNg_GMCSF1 | 0.321 | 0.255 |
| Rv1432_day32 | 0.494 | 0.441 |
| Rv1565c_day32 | 0.171 | 1.188 |
| secA2_input | 0.146 | -0.116 |
| delta_Rv3594 | -0.185 | -0.373 |
| delta_Rv3717 | -0.074 | -0.892 |
| delta_Rv3811 | -0.443 | -0.596 |
| delta_Rv0954 | 0.067 | -1.424 |
| PonA1 | -0.594 | -0.873 |
| EccD1_KO | -0.74 | -1.105 |
| EspI_KO | -0.351 | -0.759 |
| PE35_KO | -0.152 | -0.438 |
| PPE68_KO | -0.416 | -0.234 |
| glycerol2 | 0.893 | 1.006 |
| lignocerate | 0.788 | 1.456 |
| oleate | 0.73 | 0.496 |
| phosphatidylcholine | 0.779 | 1.248 |
| acetate | 0.401 | 0.582 |
| glucAc | 0.4 | 0.637 |
| Rv0950ko | 0.808 | -0.163 |
| Rv1096ko | 0.28 | 0.863 |
| Rv3684ko | 0.37 | 0.596 |
| delta_otsA_trehalose | -0.768 | -0.247 |