Top 10 genes with highest correlation to Rv3190c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1868/- | (cc=0.5045) | info on Rv1868/- |
| Rv1289/- | (cc=0.4947) | info on Rv1289/- |
| Rv1290A/- | (cc=0.476) | info on Rv1290A/- |
| Rv0264c/- | (cc=0.4724) | info on Rv0264c/- |
| Rv0278c/PE_PGRS3 | (cc=0.4683) | info on Rv0278c/PE_PGRS3 |
| Rv3136A/- | (cc=0.4605) | info on Rv3136A/- |
| Rv2958c/- | (cc=0.4567) | info on Rv2958c/- |
| Rv1803c/PE_PGRS32 | (cc=0.456) | info on Rv1803c/PE_PGRS32 |
| Rv2240c/- | (cc=0.4506) | info on Rv2240c/- |
| Rv1718/- | (cc=0.4417) | info on Rv1718/- |
Correlation of Rv3190c/- with Rv0264c/-
Normalized LFCs for Rv3190c/-:
(description and provenance of datasets)
| Rv3190c/- | Rv0264c/- | |
| Fe_supp_jason_reseq | 0.447 | -0.611 |
| low_pH_jason_reseq | -0.311 | -0.985 |
| NO_jason_reseq | 0.071 | 0.236 |
| B6_jason_reseq | 0.48 | 0.63 |
| MHCII_jason_reseq | 1.004 | 1.238 |
| Isoniazid02 | 0.271 | -0.14 |
| Rifampicin4 | 0.233 | 0.717 |
| Ethambutol3 | 0.465 | 0.376 |
| Meropenem3 | 0.865 | 1.133 |
| Vancomycin16 | 0.09 | 0.846 |
| Rv2680_day32 | 0.64 | 0.509 |
| H37Rv_KO_MarP | -0.261 | 0.134 |
| hypoxia_3wks | -0.032 | -0.303 |
| hypoxia_6wks | 0.063 | -0.639 |
| glycerol | -0.257 | 0.25 |
| cholesterol | -0.706 | -0.18 |
| AJ | -0.634 | 1.178 |
| Bibs02 | -0.03 | -1.129 |
| Bibs02c | -0.297 | 0.976 |
| BL6 | -0.074 | 0.222 |
| BL6a | -0.387 | 0.808 |
| BXD01 | -0.601 | -0.404 |
| BXD010 | -0.021 | -0.126 |
| BXD011 | -0.249 | -0.808 |
| BXD03 | -0.192 | -0.32 |
| BXD04 | 0.005 | -0.732 |
| BXD05 | -0.204 | -0.505 |
| BXD06 | -0.416 | -0.575 |
| BXD07 | -0.504 | -0.626 |
| BXD08 | -0.301 | -0.188 |
| BXD09 | -0.561 | -0.392 |
| CAST | -0.048 | 0.772 |
| CCcont | -0.269 | 0.357 |
| DS01 | 0.0 | 0.171 |
| DS02 | -0.12 | 0.503 |
| DS04 | 0.015 | 0.072 |
| DS0c | 0.231 | 0.223 |
| GP01 | 0.197 | 0.484 |
| GP02 | 1.552 | 0.872 |
| GP0c | -0.442 | 0.391 |
| NOD | -0.246 | 0.26 |
| NZO | -0.025 | -0.01 |
| PWK | -0.384 | -0.352 |
| H37Rv_KO_CtpC | -0.367 | -0.7 |
| H37Rv_KO_CtpD | 0.369 | 0.42 |
| H37Rv_KO_Rv1272 | 0.522 | -0.132 |
| H37Rv_KO_SugABC | 0.603 | -0.456 |
| H37Rv_KO_MbtN | -0.071 | -0.961 |
| Trans05 | 1.15 | 0.734 |
| macrophage_unactivated | 0.319 | -0.609 |
| IL1 | -0.303 | 0.181 |
| Rapamycin | 0.19 | 0.049 |
| Tcell | -0.235 | -0.775 |
| GMCSF | 0.232 | 0.042 |
| IFNab | -0.218 | -0.048 |
| IFNg | 0.27 | -0.973 |
| IFNg_GMCSF1 | -0.273 | -0.255 |
| Rv1432_day32 | 0.377 | -0.083 |
| Rv1565c_day32 | -0.779 | -1.017 |
| secA2_input | -0.631 | -0.939 |
| delta_Rv3594 | -0.75 | -0.864 |
| delta_Rv3717 | -0.423 | -0.526 |
| delta_Rv3811 | -0.303 | 0.271 |
| delta_Rv0954 | -0.109 | 0.324 |
| PonA1 | -0.418 | -0.694 |
| EccD1_KO | 0.691 | -0.178 |
| EspI_KO | 0.819 | 0.043 |
| PE35_KO | 0.782 | -0.414 |
| PPE68_KO | 0.611 | -0.454 |
| glycerol2 | 0.513 | 1.75 |
| lignocerate | 0.749 | 2.026 |
| oleate | -0.342 | 0.149 |
| phosphatidylcholine | 0.409 | 1.905 |
| acetate | 0.678 | 2.364 |
| glucAc | 0.872 | 2.01 |
| Rv0950ko | -0.561 | 0.244 |
| Rv1096ko | -0.184 | 0.0 |
| Rv3684ko | -0.432 | -1.107 |
| delta_otsA_trehalose | -0.227 | -0.639 |