Top 10 genes with highest correlation to Rv3188/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0691c/- | (cc=0.4375) | info on Rv0691c/- |
| Rv2800/- | (cc=0.4268) | info on Rv2800/- |
| Rv2310/- | (cc=0.424) | info on Rv2310/- |
| Rv0892/- | (cc=0.4136) | info on Rv0892/- |
| Rv1566c/- | (cc=0.4062) | info on Rv1566c/- |
| Rv2938/drrC | (cc=0.3902) | info on Rv2938/drrC |
| Rv2306B/- | (cc=0.3876) | info on Rv2306B/- |
| Rv1585c/- | (cc=0.384) | info on Rv1585c/- |
| Rv0798c/cfp29 | (cc=0.3831) | info on Rv0798c/cfp29 |
| Rv2957/- | (cc=0.3756) | info on Rv2957/- |
Correlation of Rv3188/- with Rv2306B/-
Normalized LFCs for Rv3188/-:
(description and provenance of datasets)
| Rv3188/- | Rv2306B/- | |
| Fe_supp_jason_reseq | 0.395 | 1.468 |
| low_pH_jason_reseq | 0.611 | -0.656 |
| NO_jason_reseq | -0.139 | 0.344 |
| B6_jason_reseq | 0.151 | 1.389 |
| MHCII_jason_reseq | 1.439 | 0.455 |
| Isoniazid02 | -0.134 | 0.604 |
| Rifampicin4 | -0.677 | 0.699 |
| Ethambutol3 | -0.016 | 0.226 |
| Meropenem3 | -0.031 | 0.131 |
| Vancomycin16 | -0.393 | 1.318 |
| Rv2680_day32 | -0.21 | 0.267 |
| H37Rv_KO_MarP | 0.12 | 0.023 |
| hypoxia_3wks | 0.223 | 0.638 |
| hypoxia_6wks | -0.184 | 1.28 |
| glycerol | -0.518 | -0.554 |
| cholesterol | 0.268 | -0.643 |
| AJ | 0.38 | 0.091 |
| Bibs02 | -0.837 | -1.763 |
| Bibs02c | 1.088 | 0.499 |
| BL6 | 0.917 | -0.53 |
| BL6a | 0.915 | -0.613 |
| BXD01 | 0.476 | -0.978 |
| BXD010 | 0.255 | -1.821 |
| BXD011 | 0.443 | -1.145 |
| BXD03 | 0.683 | -0.395 |
| BXD04 | 1.355 | -0.683 |
| BXD05 | -0.33 | -2.755 |
| BXD06 | 0.862 | -0.737 |
| BXD07 | 0.246 | -0.332 |
| BXD08 | -0.415 | -0.796 |
| BXD09 | 0.023 | -0.29 |
| CAST | -0.47 | -0.127 |
| CCcont | 0.93 | -0.021 |
| DS01 | 1.324 | 0.686 |
| DS02 | 0.945 | -0.246 |
| DS04 | 0.687 | -0.566 |
| DS0c | 0.52 | 0.841 |
| GP01 | -0.427 | -1.931 |
| GP02 | -1.837 | -1.275 |
| GP0c | -0.033 | -1.254 |
| NOD | 2.211 | -1.045 |
| NZO | -2.208 | -1.611 |
| PWK | -0.924 | 0.053 |
| H37Rv_KO_CtpC | 0.515 | -1.623 |
| H37Rv_KO_CtpD | 1.259 | -2.477 |
| H37Rv_KO_Rv1272 | -0.288 | -2.246 |
| H37Rv_KO_SugABC | 0.608 | 1.092 |
| H37Rv_KO_MbtN | 0.87 | -0.641 |
| Trans05 | 0.59 | -0.813 |
| macrophage_unactivated | 2.058 | 2.301 |
| IL1 | 0.332 | -1.308 |
| Rapamycin | 0.055 | -0.626 |
| Tcell | -0.27 | -1.111 |
| GMCSF | -0.615 | -1.595 |
| IFNab | -0.426 | -0.484 |
| IFNg | -1.264 | 1.211 |
| IFNg_GMCSF1 | -0.352 | 0.233 |
| Rv1432_day32 | -0.961 | 0.0 |
| Rv1565c_day32 | -0.264 | 0.716 |
| secA2_input | 0.141 | -0.235 |
| delta_Rv3594 | -0.271 | -1.037 |
| delta_Rv3717 | -0.035 | -0.96 |
| delta_Rv3811 | -0.87 | -0.947 |
| delta_Rv0954 | -0.283 | -2.222 |
| PonA1 | -1.929 | -4.022 |
| EccD1_KO | 1.687 | 3.111 |
| EspI_KO | 0.074 | 2.618 |
| PE35_KO | 1.444 | 4.623 |
| PPE68_KO | 1.901 | 5.238 |
| glycerol2 | 0.06 | -1.003 |
| lignocerate | 0.789 | 0.972 |
| oleate | 0.024 | -1.509 |
| phosphatidylcholine | 0.584 | 0.0 |
| acetate | 0.141 | 2.803 |
| glucAc | 1.043 | 1.681 |
| Rv0950ko | -0.727 | -0.407 |
| Rv1096ko | 0.555 | -0.48 |
| Rv3684ko | 0.082 | 2.256 |
| delta_otsA_trehalose | -1.196 | 0.739 |