Top 10 genes with highest correlation to Rv3175/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2772c/- | (cc=0.4656) | info on Rv2772c/- |
| Rv0875c/- | (cc=0.4494) | info on Rv0875c/- |
| Rv0740/- | (cc=0.4435) | info on Rv0740/- |
| Rv0418/lpqL | (cc=0.437) | info on Rv0418/lpqL |
| Rv3741c/- | (cc=0.4288) | info on Rv3741c/- |
| Rv3220c/- | (cc=0.4274) | info on Rv3220c/- |
| Rv2643/arsC | (cc=0.4258) | info on Rv2643/arsC |
| Rv3395A/- | (cc=0.4241) | info on Rv3395A/- |
| Rv3298c/lpqC | (cc=0.4214) | info on Rv3298c/lpqC |
| Rv0811c/- | (cc=0.4211) | info on Rv0811c/- |
Correlation of Rv3175/- with Rv2643/arsC
Normalized LFCs for Rv3175/-:
(description and provenance of datasets)
| Rv3175/- | Rv2643/arsC | |
| Fe_supp_jason_reseq | -0.834 | -0.459 |
| low_pH_jason_reseq | 1.916 | -0.025 |
| NO_jason_reseq | 0.683 | 0.278 |
| B6_jason_reseq | -0.048 | 0.176 |
| MHCII_jason_reseq | 0.534 | 0.255 |
| Isoniazid02 | 0.623 | 0.371 |
| Rifampicin4 | -0.084 | 0.106 |
| Ethambutol3 | 0.565 | 0.173 |
| Meropenem3 | 1.167 | 2.282 |
| Vancomycin16 | 0.236 | 0.305 |
| Rv2680_day32 | -0.462 | 0.105 |
| H37Rv_KO_MarP | -0.322 | 0.219 |
| hypoxia_3wks | 0.076 | -0.171 |
| hypoxia_6wks | -0.894 | -0.313 |
| glycerol | -0.889 | -0.591 |
| cholesterol | -0.652 | -0.029 |
| AJ | -0.657 | 0.103 |
| Bibs02 | -0.012 | -0.162 |
| Bibs02c | 0.055 | -0.327 |
| BL6 | -0.05 | 0.192 |
| BL6a | -0.161 | -0.165 |
| BXD01 | 0.0 | 0.0 |
| BXD010 | -0.132 | 0.439 |
| BXD011 | -0.14 | -0.045 |
| BXD03 | -0.582 | -0.377 |
| BXD04 | -0.058 | 0.432 |
| BXD05 | -0.733 | 0.642 |
| BXD06 | 0.225 | 0.078 |
| BXD07 | 0.044 | 0.021 |
| BXD08 | -0.036 | 0.0 |
| BXD09 | -0.605 | 0.19 |
| CAST | 0.073 | -0.255 |
| CCcont | -0.23 | -0.314 |
| DS01 | -0.192 | -0.084 |
| DS02 | 0.057 | 0.096 |
| DS04 | 0.159 | 0.412 |
| DS0c | -0.402 | 0.137 |
| GP01 | -0.28 | 0.324 |
| GP02 | -1.456 | -0.184 |
| GP0c | -0.241 | -0.645 |
| NOD | -0.47 | 0.467 |
| NZO | -0.897 | 0.126 |
| PWK | -0.23 | -0.02 |
| H37Rv_KO_CtpC | -0.011 | -0.18 |
| H37Rv_KO_CtpD | 0.185 | -0.228 |
| H37Rv_KO_Rv1272 | -1.097 | -0.133 |
| H37Rv_KO_SugABC | -0.102 | 0.388 |
| H37Rv_KO_MbtN | -0.136 | -1.178 |
| Trans05 | -0.097 | -0.145 |
| macrophage_unactivated | 0.253 | 0.401 |
| IL1 | -0.249 | 0.11 |
| Rapamycin | 0.061 | 0.178 |
| Tcell | -0.528 | -0.222 |
| GMCSF | 0.528 | -0.327 |
| IFNab | -0.094 | 0.0 |
| IFNg | 0.214 | 0.818 |
| IFNg_GMCSF1 | 0.657 | 0.506 |
| Rv1432_day32 | 0.609 | 0.357 |
| Rv1565c_day32 | 0.316 | -0.851 |
| secA2_input | 0.322 | 0.18 |
| delta_Rv3594 | -0.835 | -0.592 |
| delta_Rv3717 | -1.226 | -0.741 |
| delta_Rv3811 | -1.692 | -0.915 |
| delta_Rv0954 | -0.444 | -0.258 |
| PonA1 | -0.422 | 1.005 |
| EccD1_KO | 0.763 | 0.0 |
| EspI_KO | 0.827 | 0.194 |
| PE35_KO | 0.131 | -0.088 |
| PPE68_KO | -0.304 | -0.262 |
| glycerol2 | 0.077 | -0.062 |
| lignocerate | 0.144 | 0.132 |
| oleate | 0.578 | 0.254 |
| phosphatidylcholine | 0.165 | 0.207 |
| acetate | 0.281 | -0.073 |
| glucAc | 0.085 | -0.027 |
| Rv0950ko | -0.305 | 0.612 |
| Rv1096ko | 0.866 | 1.149 |
| Rv3684ko | 1.133 | 0.344 |
| delta_otsA_trehalose | -0.192 | -0.771 |