Top 10 genes with highest correlation to Rv3175/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2772c/- | (cc=0.4656) | info on Rv2772c/- |
| Rv0875c/- | (cc=0.4494) | info on Rv0875c/- |
| Rv0740/- | (cc=0.4435) | info on Rv0740/- |
| Rv0418/lpqL | (cc=0.437) | info on Rv0418/lpqL |
| Rv3741c/- | (cc=0.4288) | info on Rv3741c/- |
| Rv3220c/- | (cc=0.4274) | info on Rv3220c/- |
| Rv2643/arsC | (cc=0.4258) | info on Rv2643/arsC |
| Rv3395A/- | (cc=0.4241) | info on Rv3395A/- |
| Rv3298c/lpqC | (cc=0.4214) | info on Rv3298c/lpqC |
| Rv0811c/- | (cc=0.4211) | info on Rv0811c/- |
Correlation of Rv3175/- with Rv0740/-
Normalized LFCs for Rv3175/-:
(description and provenance of datasets)
| Rv3175/- | Rv0740/- | |
| Fe_supp_jason_reseq | -0.834 | 0.069 |
| low_pH_jason_reseq | 1.916 | 1.802 |
| NO_jason_reseq | 0.683 | 0.774 |
| B6_jason_reseq | -0.048 | 1.02 |
| MHCII_jason_reseq | 0.534 | 0.233 |
| Isoniazid02 | 0.623 | 0.989 |
| Rifampicin4 | -0.084 | 0.087 |
| Ethambutol3 | 0.565 | 1.16 |
| Meropenem3 | 1.167 | 0.688 |
| Vancomycin16 | 0.236 | 0.17 |
| Rv2680_day32 | -0.462 | -1.013 |
| H37Rv_KO_MarP | -0.322 | -0.027 |
| hypoxia_3wks | 0.076 | -1.854 |
| hypoxia_6wks | -0.894 | -1.063 |
| glycerol | -0.889 | -1.09 |
| cholesterol | -0.652 | -0.158 |
| AJ | -0.657 | -0.345 |
| Bibs02 | -0.012 | -0.901 |
| Bibs02c | 0.055 | -0.203 |
| BL6 | -0.05 | 0.712 |
| BL6a | -0.161 | 0.089 |
| BXD01 | 0.0 | 0.428 |
| BXD010 | -0.132 | -0.781 |
| BXD011 | -0.14 | 0.235 |
| BXD03 | -0.582 | 0.197 |
| BXD04 | -0.058 | 0.826 |
| BXD05 | -0.733 | 0.525 |
| BXD06 | 0.225 | 0.031 |
| BXD07 | 0.044 | 0.557 |
| BXD08 | -0.036 | 0.465 |
| BXD09 | -0.605 | -0.218 |
| CAST | 0.073 | 0.566 |
| CCcont | -0.23 | 0.195 |
| DS01 | -0.192 | 0.296 |
| DS02 | 0.057 | 0.147 |
| DS04 | 0.159 | 0.358 |
| DS0c | -0.402 | 0.347 |
| GP01 | -0.28 | -1.157 |
| GP02 | -1.456 | -0.877 |
| GP0c | -0.241 | -0.753 |
| NOD | -0.47 | 0.039 |
| NZO | -0.897 | -1.503 |
| PWK | -0.23 | -0.215 |
| H37Rv_KO_CtpC | -0.011 | -1.662 |
| H37Rv_KO_CtpD | 0.185 | 0.264 |
| H37Rv_KO_Rv1272 | -1.097 | -0.317 |
| H37Rv_KO_SugABC | -0.102 | -0.969 |
| H37Rv_KO_MbtN | -0.136 | -0.706 |
| Trans05 | -0.097 | -0.284 |
| macrophage_unactivated | 0.253 | 1.925 |
| IL1 | -0.249 | 0.406 |
| Rapamycin | 0.061 | 1.178 |
| Tcell | -0.528 | -0.147 |
| GMCSF | 0.528 | 0.689 |
| IFNab | -0.094 | 0.29 |
| IFNg | 0.214 | 1.267 |
| IFNg_GMCSF1 | 0.657 | 3.02 |
| Rv1432_day32 | 0.609 | -0.222 |
| Rv1565c_day32 | 0.316 | -1.579 |
| secA2_input | 0.322 | -1.105 |
| delta_Rv3594 | -0.835 | -1.444 |
| delta_Rv3717 | -1.226 | -0.789 |
| delta_Rv3811 | -1.692 | -1.022 |
| delta_Rv0954 | -0.444 | 0.15 |
| PonA1 | -0.422 | -0.668 |
| EccD1_KO | 0.763 | -0.141 |
| EspI_KO | 0.827 | 0.0 |
| PE35_KO | 0.131 | 0.216 |
| PPE68_KO | -0.304 | 0.186 |
| glycerol2 | 0.077 | -0.129 |
| lignocerate | 0.144 | 0.0 |
| oleate | 0.578 | -1.602 |
| phosphatidylcholine | 0.165 | -0.384 |
| acetate | 0.281 | 0.69 |
| glucAc | 0.085 | 0.868 |
| Rv0950ko | -0.305 | -0.292 |
| Rv1096ko | 0.866 | 0.407 |
| Rv3684ko | 1.133 | -0.183 |
| delta_otsA_trehalose | -0.192 | -0.138 |