Top 10 genes with highest correlation to Rv3172c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3747/- | (cc=0.5001) | info on Rv3747/- |
| Rv2960c/- | (cc=0.4806) | info on Rv2960c/- |
| Rv3174/- | (cc=0.4735) | info on Rv3174/- |
| Rv0854/- | (cc=0.468) | info on Rv0854/- |
| Rv1290c/- | (cc=0.4656) | info on Rv1290c/- |
| Rv2958c/- | (cc=0.4401) | info on Rv2958c/- |
| Rv2809/- | (cc=0.435) | info on Rv2809/- |
| Rv2970A/- | (cc=0.4304) | info on Rv2970A/- |
| Rv3660c/- | (cc=0.4285) | info on Rv3660c/- |
| Rv1915/aceAa | (cc=0.4157) | info on Rv1915/aceAa |
Correlation of Rv3172c/- with Rv2809/-
Normalized LFCs for Rv3172c/-:
(description and provenance of datasets)
| Rv3172c/- | Rv2809/- | |
| Fe_supp_jason_reseq | 0.672 | 0.592 |
| low_pH_jason_reseq | -0.617 | -0.236 |
| NO_jason_reseq | 0.32 | 0.62 |
| B6_jason_reseq | 0.496 | 0.436 |
| MHCII_jason_reseq | 0.991 | 1.042 |
| Isoniazid02 | 1.98 | -0.825 |
| Rifampicin4 | 0.032 | 0.246 |
| Ethambutol3 | 1.927 | 1.547 |
| Meropenem3 | -0.966 | -0.146 |
| Vancomycin16 | -0.485 | -0.032 |
| Rv2680_day32 | 0.157 | -2.243 |
| H37Rv_KO_MarP | 0.08 | -0.476 |
| hypoxia_3wks | -0.423 | -0.271 |
| hypoxia_6wks | -0.459 | 0.098 |
| glycerol | -2.279 | -2.478 |
| cholesterol | -0.317 | -0.07 |
| AJ | -0.983 | 0.087 |
| Bibs02 | -0.061 | -0.126 |
| Bibs02c | 0.055 | -1.253 |
| BL6 | 0.471 | 1.036 |
| BL6a | 0.303 | -0.019 |
| BXD01 | 0.25 | 1.196 |
| BXD010 | -0.433 | 1.083 |
| BXD011 | -0.087 | 0.899 |
| BXD03 | 0.324 | 0.735 |
| BXD04 | -0.119 | 1.117 |
| BXD05 | 0.438 | 1.149 |
| BXD06 | 0.421 | 0.414 |
| BXD07 | -0.216 | 0.936 |
| BXD08 | 0.445 | 1.493 |
| BXD09 | 0.124 | 0.747 |
| CAST | 0.118 | -0.022 |
| CCcont | 0.662 | 1.331 |
| DS01 | 0.106 | -0.186 |
| DS02 | -0.547 | 0.414 |
| DS04 | -0.052 | -0.946 |
| DS0c | -0.338 | -0.585 |
| GP01 | 0.644 | 0.667 |
| GP02 | -0.369 | 1.361 |
| GP0c | -0.089 | 0.599 |
| NOD | 0.317 | 0.895 |
| NZO | -0.387 | 0.618 |
| PWK | -0.629 | -0.301 |
| H37Rv_KO_CtpC | 0.293 | 1.032 |
| H37Rv_KO_CtpD | 0.472 | -1.764 |
| H37Rv_KO_Rv1272 | 0.141 | 1.858 |
| H37Rv_KO_SugABC | -0.43 | -0.048 |
| H37Rv_KO_MbtN | 0.0 | 0.196 |
| Trans05 | 0.858 | 1.384 |
| macrophage_unactivated | -0.341 | 0.552 |
| IL1 | -0.635 | -1.48 |
| Rapamycin | 0.132 | -0.509 |
| Tcell | 0.378 | 0.57 |
| GMCSF | 0.0 | -0.71 |
| IFNab | -0.354 | -1.345 |
| IFNg | 0.203 | 0.0 |
| IFNg_GMCSF1 | 1.351 | 0.355 |
| Rv1432_day32 | -0.162 | -0.729 |
| Rv1565c_day32 | -0.153 | -0.667 |
| secA2_input | -0.042 | -0.883 |
| delta_Rv3594 | -0.493 | 0.125 |
| delta_Rv3717 | -0.773 | 0.045 |
| delta_Rv3811 | -0.375 | 0.439 |
| delta_Rv0954 | -0.447 | -0.562 |
| PonA1 | -0.532 | -2.086 |
| EccD1_KO | -0.493 | 0.414 |
| EspI_KO | -0.359 | 0.964 |
| PE35_KO | 0.423 | 1.219 |
| PPE68_KO | 0.56 | 1.494 |
| glycerol2 | 0.5 | 0.247 |
| lignocerate | 1.199 | 0.933 |
| oleate | -0.191 | -0.072 |
| phosphatidylcholine | 0.725 | 0.569 |
| acetate | 0.918 | 0.702 |
| glucAc | 0.955 | 0.594 |
| Rv0950ko | -0.769 | -0.914 |
| Rv1096ko | -0.341 | -2.015 |
| Rv3684ko | -0.521 | -1.385 |
| delta_otsA_trehalose | -0.074 | 0.0 |