Top 10 genes with highest correlation to Rv3172c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3747/- | (cc=0.5001) | info on Rv3747/- |
| Rv2960c/- | (cc=0.4806) | info on Rv2960c/- |
| Rv3174/- | (cc=0.4735) | info on Rv3174/- |
| Rv0854/- | (cc=0.468) | info on Rv0854/- |
| Rv1290c/- | (cc=0.4656) | info on Rv1290c/- |
| Rv2958c/- | (cc=0.4401) | info on Rv2958c/- |
| Rv2809/- | (cc=0.435) | info on Rv2809/- |
| Rv2970A/- | (cc=0.4304) | info on Rv2970A/- |
| Rv3660c/- | (cc=0.4285) | info on Rv3660c/- |
| Rv1915/aceAa | (cc=0.4157) | info on Rv1915/aceAa |
Correlation of Rv3172c/- with Rv3747/-
Normalized LFCs for Rv3172c/-:
(description and provenance of datasets)
| Rv3172c/- | Rv3747/- | |
| Fe_supp_jason_reseq | 0.672 | 0.009 |
| low_pH_jason_reseq | -0.617 | -0.554 |
| NO_jason_reseq | 0.32 | -0.633 |
| B6_jason_reseq | 0.496 | -0.965 |
| MHCII_jason_reseq | 0.991 | -0.776 |
| Isoniazid02 | 1.98 | 0.848 |
| Rifampicin4 | 0.032 | -0.414 |
| Ethambutol3 | 1.927 | 0.646 |
| Meropenem3 | -0.966 | -0.307 |
| Vancomycin16 | -0.485 | -0.366 |
| Rv2680_day32 | 0.157 | -0.198 |
| H37Rv_KO_MarP | 0.08 | 0.577 |
| hypoxia_3wks | -0.423 | -0.351 |
| hypoxia_6wks | -0.459 | 0.395 |
| glycerol | -2.279 | -2.738 |
| cholesterol | -0.317 | -1.062 |
| AJ | -0.983 | 0.487 |
| Bibs02 | -0.061 | -0.38 |
| Bibs02c | 0.055 | 0.728 |
| BL6 | 0.471 | -0.121 |
| BL6a | 0.303 | 0.359 |
| BXD01 | 0.25 | -0.45 |
| BXD010 | -0.433 | 0.033 |
| BXD011 | -0.087 | -0.225 |
| BXD03 | 0.324 | -0.15 |
| BXD04 | -0.119 | -0.632 |
| BXD05 | 0.438 | 0.416 |
| BXD06 | 0.421 | -0.123 |
| BXD07 | -0.216 | -0.38 |
| BXD08 | 0.445 | -0.174 |
| BXD09 | 0.124 | -0.278 |
| CAST | 0.118 | -0.407 |
| CCcont | 0.662 | 0.437 |
| DS01 | 0.106 | 0.18 |
| DS02 | -0.547 | 0.402 |
| DS04 | -0.052 | -0.178 |
| DS0c | -0.338 | -0.038 |
| GP01 | 0.644 | 1.006 |
| GP02 | -0.369 | 0.141 |
| GP0c | -0.089 | 0.25 |
| NOD | 0.317 | 0.391 |
| NZO | -0.387 | -0.301 |
| PWK | -0.629 | -0.516 |
| H37Rv_KO_CtpC | 0.293 | 0.781 |
| H37Rv_KO_CtpD | 0.472 | 0.612 |
| H37Rv_KO_Rv1272 | 0.141 | 0.084 |
| H37Rv_KO_SugABC | -0.43 | 0.636 |
| H37Rv_KO_MbtN | 0.0 | 0.04 |
| Trans05 | 0.858 | 0.147 |
| macrophage_unactivated | -0.341 | -0.464 |
| IL1 | -0.635 | 0.044 |
| Rapamycin | 0.132 | -0.451 |
| Tcell | 0.378 | -1.036 |
| GMCSF | 0.0 | 0.277 |
| IFNab | -0.354 | -0.411 |
| IFNg | 0.203 | 0.11 |
| IFNg_GMCSF1 | 1.351 | 0.594 |
| Rv1432_day32 | -0.162 | -0.383 |
| Rv1565c_day32 | -0.153 | 0.177 |
| secA2_input | -0.042 | -0.333 |
| delta_Rv3594 | -0.493 | -1.149 |
| delta_Rv3717 | -0.773 | -0.725 |
| delta_Rv3811 | -0.375 | -0.247 |
| delta_Rv0954 | -0.447 | -0.419 |
| PonA1 | -0.532 | -0.222 |
| EccD1_KO | -0.493 | -0.789 |
| EspI_KO | -0.359 | -0.471 |
| PE35_KO | 0.423 | -0.685 |
| PPE68_KO | 0.56 | -0.854 |
| glycerol2 | 0.5 | 0.946 |
| lignocerate | 1.199 | 1.139 |
| oleate | -0.191 | -0.649 |
| phosphatidylcholine | 0.725 | 0.66 |
| acetate | 0.918 | 1.765 |
| glucAc | 0.955 | 0.96 |
| Rv0950ko | -0.769 | 0.561 |
| Rv1096ko | -0.341 | 0.709 |
| Rv3684ko | -0.521 | 0.111 |
| delta_otsA_trehalose | -0.074 | -1.212 |