Top 10 genes with highest correlation to Rv3125c/PPE49:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3116/moeB2 | (cc=0.6699) | info on Rv3116/moeB2 |
| Rv3146/nuoB | (cc=0.6693) | info on Rv3146/nuoB |
| Rv1831/- | (cc=0.6491) | info on Rv1831/- |
| Rv1521/fadD25 | (cc=0.6359) | info on Rv1521/fadD25 |
| Rv2957/- | (cc=0.6276) | info on Rv2957/- |
| Rv1059/- | (cc=0.6247) | info on Rv1059/- |
| Rv3854c/ethA | (cc=0.6093) | info on Rv3854c/ethA |
| Rv3153/nuoI | (cc=0.6083) | info on Rv3153/nuoI |
| Rv1914c/- | (cc=0.6082) | info on Rv1914c/- |
| Rv1213/glgC | (cc=0.6034) | info on Rv1213/glgC |
Correlation of Rv3125c/PPE49 with Rv3153/nuoI
Normalized LFCs for Rv3125c/PPE49:
(description and provenance of datasets)
| Rv3125c/PPE49 | Rv3153/nuoI | |
| Fe_supp_jason_reseq | 0.477 | -0.287 |
| low_pH_jason_reseq | -0.905 | 0.087 |
| NO_jason_reseq | -0.341 | -0.641 |
| B6_jason_reseq | -0.782 | -0.048 |
| MHCII_jason_reseq | -0.117 | -1.143 |
| Isoniazid02 | -1.523 | -0.831 |
| Rifampicin4 | 0.601 | 0.171 |
| Ethambutol3 | -0.043 | -0.833 |
| Meropenem3 | -0.69 | -1.41 |
| Vancomycin16 | -0.401 | -1.037 |
| Rv2680_day32 | 0.166 | 0.447 |
| H37Rv_KO_MarP | 0.416 | -0.653 |
| hypoxia_3wks | 0.156 | 1.089 |
| hypoxia_6wks | -0.301 | 0.8 |
| glycerol | -0.758 | 0.233 |
| cholesterol | -0.625 | -0.306 |
| AJ | -0.407 | -0.168 |
| Bibs02 | -0.477 | -0.466 |
| Bibs02c | -0.565 | 0.274 |
| BL6 | 0.71 | 1.6 |
| BL6a | 0.591 | 1.855 |
| BXD01 | 0.585 | 1.737 |
| BXD010 | 0.68 | 1.805 |
| BXD011 | 0.847 | 2.199 |
| BXD03 | 0.866 | 1.505 |
| BXD04 | 0.919 | 1.562 |
| BXD05 | 1.016 | 1.926 |
| BXD06 | 0.893 | 1.917 |
| BXD07 | 0.858 | 1.59 |
| BXD08 | 0.984 | 2.086 |
| BXD09 | 0.923 | 1.922 |
| CAST | -0.404 | 0.04 |
| CCcont | 0.879 | 1.069 |
| DS01 | -0.524 | 0.616 |
| DS02 | -0.102 | 0.896 |
| DS04 | -0.322 | 0.426 |
| DS0c | -0.137 | 1.771 |
| GP01 | -0.031 | 0.68 |
| GP02 | 0.54 | 0.875 |
| GP0c | -0.314 | 0.823 |
| NOD | -0.034 | -0.291 |
| NZO | -0.98 | 0.0 |
| PWK | -0.206 | -0.293 |
| H37Rv_KO_CtpC | 0.68 | 0.611 |
| H37Rv_KO_CtpD | 1.285 | 1.755 |
| H37Rv_KO_Rv1272 | 0.806 | 1.526 |
| H37Rv_KO_SugABC | 1.266 | 0.935 |
| H37Rv_KO_MbtN | 0.88 | 0.018 |
| Trans05 | 0.694 | 1.287 |
| macrophage_unactivated | -0.126 | -0.199 |
| IL1 | -0.208 | -0.469 |
| Rapamycin | -0.365 | -0.11 |
| Tcell | -0.326 | -0.029 |
| GMCSF | -0.137 | 0.52 |
| IFNab | -0.396 | 0.571 |
| IFNg | -0.045 | -0.294 |
| IFNg_GMCSF1 | 0.493 | -0.085 |
| Rv1432_day32 | -0.063 | 0.259 |
| Rv1565c_day32 | -0.232 | -0.218 |
| secA2_input | -0.567 | -0.379 |
| delta_Rv3594 | 0.347 | -0.647 |
| delta_Rv3717 | 0.193 | -0.211 |
| delta_Rv3811 | 0.454 | 0.0 |
| delta_Rv0954 | -0.619 | -0.526 |
| PonA1 | -0.02 | -0.396 |
| EccD1_KO | 0.355 | 0.467 |
| EspI_KO | 0.191 | 0.0 |
| PE35_KO | 0.292 | 0.592 |
| PPE68_KO | 0.054 | 0.682 |
| glycerol2 | -0.175 | 1.883 |
| lignocerate | -0.373 | -0.582 |
| oleate | -0.034 | 2.298 |
| phosphatidylcholine | -0.269 | -0.669 |
| acetate | -0.595 | -0.259 |
| glucAc | -0.52 | 0.54 |
| Rv0950ko | 0.35 | 0.136 |
| Rv1096ko | 0.06 | 0.054 |
| Rv3684ko | -0.157 | -0.18 |
| delta_otsA_trehalose | -1.215 | -0.029 |