Top 10 genes with highest correlation to Rv3125c/PPE49:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3116/moeB2 | (cc=0.6699) | info on Rv3116/moeB2 |
| Rv3146/nuoB | (cc=0.6693) | info on Rv3146/nuoB |
| Rv1831/- | (cc=0.6491) | info on Rv1831/- |
| Rv1521/fadD25 | (cc=0.6359) | info on Rv1521/fadD25 |
| Rv2957/- | (cc=0.6276) | info on Rv2957/- |
| Rv1059/- | (cc=0.6247) | info on Rv1059/- |
| Rv3854c/ethA | (cc=0.6093) | info on Rv3854c/ethA |
| Rv3153/nuoI | (cc=0.6083) | info on Rv3153/nuoI |
| Rv1914c/- | (cc=0.6082) | info on Rv1914c/- |
| Rv1213/glgC | (cc=0.6034) | info on Rv1213/glgC |
Correlation of Rv3125c/PPE49 with Rv3116/moeB2
Normalized LFCs for Rv3125c/PPE49:
(description and provenance of datasets)
| Rv3125c/PPE49 | Rv3116/moeB2 | |
| Fe_supp_jason_reseq | 0.477 | 0.753 |
| low_pH_jason_reseq | -0.905 | -0.539 |
| NO_jason_reseq | -0.341 | -0.483 |
| B6_jason_reseq | -0.782 | 0.435 |
| MHCII_jason_reseq | -0.117 | 0.474 |
| Isoniazid02 | -1.523 | -1.141 |
| Rifampicin4 | 0.601 | -0.051 |
| Ethambutol3 | -0.043 | -0.544 |
| Meropenem3 | -0.69 | -1.06 |
| Vancomycin16 | -0.401 | -0.332 |
| Rv2680_day32 | 0.166 | -0.749 |
| H37Rv_KO_MarP | 0.416 | -0.322 |
| hypoxia_3wks | 0.156 | 0.279 |
| hypoxia_6wks | -0.301 | -0.184 |
| glycerol | -0.758 | -0.707 |
| cholesterol | -0.625 | -0.491 |
| AJ | -0.407 | -0.235 |
| Bibs02 | -0.477 | -0.445 |
| Bibs02c | -0.565 | 0.099 |
| BL6 | 0.71 | 0.681 |
| BL6a | 0.591 | 0.763 |
| BXD01 | 0.585 | 0.64 |
| BXD010 | 0.68 | 0.848 |
| BXD011 | 0.847 | 1.007 |
| BXD03 | 0.866 | 0.782 |
| BXD04 | 0.919 | 0.983 |
| BXD05 | 1.016 | 1.152 |
| BXD06 | 0.893 | 0.642 |
| BXD07 | 0.858 | 0.666 |
| BXD08 | 0.984 | 0.673 |
| BXD09 | 0.923 | 0.712 |
| CAST | -0.404 | -0.057 |
| CCcont | 0.879 | 0.584 |
| DS01 | -0.524 | 0.435 |
| DS02 | -0.102 | 0.777 |
| DS04 | -0.322 | 0.555 |
| DS0c | -0.137 | 0.383 |
| GP01 | -0.031 | 0.277 |
| GP02 | 0.54 | 0.652 |
| GP0c | -0.314 | 0.307 |
| NOD | -0.034 | -0.111 |
| NZO | -0.98 | -0.256 |
| PWK | -0.206 | -0.287 |
| H37Rv_KO_CtpC | 0.68 | 0.608 |
| H37Rv_KO_CtpD | 1.285 | 0.987 |
| H37Rv_KO_Rv1272 | 0.806 | 0.52 |
| H37Rv_KO_SugABC | 1.266 | 0.234 |
| H37Rv_KO_MbtN | 0.88 | 0.791 |
| Trans05 | 0.694 | 0.687 |
| macrophage_unactivated | -0.126 | 0.275 |
| IL1 | -0.208 | -0.133 |
| Rapamycin | -0.365 | -0.356 |
| Tcell | -0.326 | 0.094 |
| GMCSF | -0.137 | 0.391 |
| IFNab | -0.396 | -0.16 |
| IFNg | -0.045 | -0.374 |
| IFNg_GMCSF1 | 0.493 | 0.091 |
| Rv1432_day32 | -0.063 | -0.168 |
| Rv1565c_day32 | -0.232 | -0.158 |
| secA2_input | -0.567 | -0.704 |
| delta_Rv3594 | 0.347 | 0.265 |
| delta_Rv3717 | 0.193 | 0.036 |
| delta_Rv3811 | 0.454 | -0.18 |
| delta_Rv0954 | -0.619 | 0.224 |
| PonA1 | -0.02 | 0.066 |
| EccD1_KO | 0.355 | -0.22 |
| EspI_KO | 0.191 | -0.026 |
| PE35_KO | 0.292 | -0.222 |
| PPE68_KO | 0.054 | -0.029 |
| glycerol2 | -0.175 | 0.252 |
| lignocerate | -0.373 | -0.142 |
| oleate | -0.034 | 0.885 |
| phosphatidylcholine | -0.269 | 0.293 |
| acetate | -0.595 | -0.61 |
| glucAc | -0.52 | -1.047 |
| Rv0950ko | 0.35 | -0.072 |
| Rv1096ko | 0.06 | -0.977 |
| Rv3684ko | -0.157 | -0.603 |
| delta_otsA_trehalose | -1.215 | -0.223 |