TnSeqCorr

Top 10 genes with highest correlation to Rv3110/moaB1:

update plotcorrelationlink to info on gene
Rv1521/fadD25 (cc=0.5747) info on Rv1521/fadD25
Rv1984c/cfp21 (cc=0.5337) info on Rv1984c/cfp21
Rv1861/- (cc=0.5186) info on Rv1861/-
Rv2491/- (cc=0.5125) info on Rv2491/-
Rv3121/cyp141 (cc=0.5063) info on Rv3121/cyp141
Rv1456c/- (cc=0.4815) info on Rv1456c/-
Rv1551/plsB1 (cc=0.4618) info on Rv1551/plsB1
Rv2962c/- (cc=0.4558) info on Rv2962c/-
Rv1949c/- (cc=0.4541) info on Rv1949c/-
Rv1213/glgC (cc=0.448) info on Rv1213/glgC

Correlation of Rv3110/moaB1 with Rv3121/cyp141

Normalized LFCs for Rv3110/moaB1:
(description and provenance of datasets)
Rv3110/moaB1Rv3121/cyp141
Fe_supp_jason_reseq

1.718

-0.09

low_pH_jason_reseq

-0.552

-0.338

NO_jason_reseq

0.176

-0.307

B6_jason_reseq

-0.448

-1.005

MHCII_jason_reseq

-0.669

0.254

Isoniazid02

-0.367

-0.135

Rifampicin4

-0.929

0.198

Ethambutol3

0.202

0.185

Meropenem3

-0.341

0.127

Vancomycin16

0.26

0.08

Rv2680_day32

0.495

0.085

H37Rv_KO_MarP

0.152

0.317

hypoxia_3wks

0.315

-0.132

hypoxia_6wks

0.541

-0.15

glycerol

-3.05

-1.676

cholesterol

0.0

-0.524

AJ

-0.227

-0.336

Bibs02

-0.415

0.313

Bibs02c

-1.141

-0.194

BL6

0.483

-0.01

BL6a

0.099

-0.601

BXD01

-0.456

-0.436

BXD010

0.36

-0.256

BXD011

-0.066

-0.173

BXD03

-0.555

-0.137

BXD04

-0.144

-0.073

BXD05

0.251

-0.114

BXD06

0.044

-0.159

BXD07

0.069

-0.283

BXD08

-0.419

-0.047

BXD09

-0.061

-0.427

CAST

-1.096

0.062

CCcont

-0.633

-0.557

DS01

-0.664

0.125

DS02

-0.922

-0.277

DS04

-0.503

-0.108

DS0c

-0.134

-0.104

GP01

1.334

0.52

GP02

-0.18

0.253

GP0c

0.808

-0.005

NOD

-0.462

1.285

NZO

-0.29

-0.071

PWK

-0.988

0.111

H37Rv_KO_CtpC

1.258

0.224

H37Rv_KO_CtpD

2.169

1.157

H37Rv_KO_Rv1272

1.895

0.488

H37Rv_KO_SugABC

1.661

-0.26

H37Rv_KO_MbtN

1.473

0.942

Trans05

0.717

0.088

macrophage_unactivated

-0.35

0.253

IL1

-0.46

-1.083

Rapamycin

-0.568

-0.694

Tcell

0.573

-0.411

GMCSF

0.0

0.259

IFNab

0.348

-0.157

IFNg

-1.016

-0.299

IFNg_GMCSF1

-0.258

0.079

Rv1432_day32

-0.782

-0.52

Rv1565c_day32

0.51

0.535

secA2_input

-1.077

-0.571

delta_Rv3594

0.486

0.543

delta_Rv3717

0.023

-0.092

delta_Rv3811

0.607

-0.098

delta_Rv0954

-0.119

-0.158

PonA1

-0.162

-0.359

EccD1_KO

0.141

0.082

EspI_KO

-0.371

0.356

PE35_KO

0.484

0.446

PPE68_KO

0.339

0.525

glycerol2

-0.132

0.706

lignocerate

-0.132

0.138

oleate

-0.057

0.875

phosphatidylcholine

0.289

0.458

acetate

-0.399

-0.361

glucAc

-0.585

-0.57

Rv0950ko

0.516

0.187

Rv1096ko

-0.887

-0.531

Rv3684ko

-0.203

-0.196

delta_otsA_trehalose

0.208

0.362