TnSeqCorr

Top 10 genes with highest correlation to Rv3109/moaA1:

update plotcorrelationlink to info on gene
Rv0830/- (cc=0.5729) info on Rv0830/-
Rv3514/PE_PGRS57 (cc=0.5591) info on Rv3514/PE_PGRS57
Rv0342/iniA (cc=0.5579) info on Rv0342/iniA
Rv3508/PE_PGRS54 (cc=0.5395) info on Rv3508/PE_PGRS54
Rv1488/- (cc=0.533) info on Rv1488/-
Rv0160c/PE4 (cc=0.5132) info on Rv0160c/PE4
Rv3312c/- (cc=0.4917) info on Rv3312c/-
Rv0404/fadD30 (cc=0.4811) info on Rv0404/fadD30
Rv2143/- (cc=0.4807) info on Rv2143/-
Rv0968/- (cc=0.4799) info on Rv0968/-

Correlation of Rv3109/moaA1 with Rv0404/fadD30

Normalized LFCs for Rv3109/moaA1:
(description and provenance of datasets)
Rv3109/moaA1Rv0404/fadD30
Fe_supp_jason_reseq

0.579

0.556

low_pH_jason_reseq

-1.109

0.549

NO_jason_reseq

-0.651

0.158

B6_jason_reseq

0.082

0.162

MHCII_jason_reseq

0.841

0.581

Isoniazid02

-1.881

-0.358

Rifampicin4

0.523

-0.236

Ethambutol3

-1.529

-0.563

Meropenem3

-1.345

-0.141

Vancomycin16

-0.456

-0.077

Rv2680_day32

0.174

0.21

H37Rv_KO_MarP

-0.648

0.282

hypoxia_3wks

0.163

0.443

hypoxia_6wks

-0.088

0.447

glycerol

0.0

-0.531

cholesterol

-0.674

0.129

AJ

0.834

0.207

Bibs02

-0.319

1.027

Bibs02c

-0.365

-0.152

BL6

-0.69

0.138

BL6a

-0.613

0.133

BXD01

-0.147

0.03

BXD010

-0.352

0.114

BXD011

0.0

0.53

BXD03

-0.943

0.383

BXD04

0.556

0.553

BXD05

0.17

0.68

BXD06

-0.073

0.33

BXD07

-0.702

-0.1

BXD08

0.289

-0.235

BXD09

-0.654

0.398

CAST

0.062

0.205

CCcont

-0.633

-0.348

DS01

-0.267

0.108

DS02

-0.837

0.372

DS04

0.697

-0.093

DS0c

-0.919

-0.05

GP01

0.335

0.067

GP02

0.765

-0.622

GP0c

0.035

-0.23

NOD

-0.617

0.151

NZO

0.559

0.701

PWK

-0.281

0.132

H37Rv_KO_CtpC

0.242

-0.158

H37Rv_KO_CtpD

1.273

1.03

H37Rv_KO_Rv1272

1.166

0.848

H37Rv_KO_SugABC

0.171

0.784

H37Rv_KO_MbtN

0.534

0.156

Trans05

1.08

0.661

macrophage_unactivated

-0.363

-0.186

IL1

-1.818

-0.848

Rapamycin

-0.945

-0.878

Tcell

-0.186

0.186

GMCSF

-1.001

-0.401

IFNab

-1.37

-0.363

IFNg

-1.419

-0.078

IFNg_GMCSF1

-0.361

-0.28

Rv1432_day32

-0.231

0.0

Rv1565c_day32

0.952

0.142

secA2_input

0.377

-0.283

delta_Rv3594

-0.58

-0.549

delta_Rv3717

-0.826

-0.452

delta_Rv3811

-0.849

-1.12

delta_Rv0954

-0.311

-0.589

PonA1

-1.287

-0.733

EccD1_KO

0.49

0.086

EspI_KO

-1.124

-0.234

PE35_KO

-1.033

0.076

PPE68_KO

-0.419

0.41

glycerol2

0.395

-0.144

lignocerate

0.0

-0.446

oleate

0.259

0.264

phosphatidylcholine

0.483

0.102

acetate

0.0

-0.454

glucAc

-0.216

-0.841

Rv0950ko

0.537

0.467

Rv1096ko

-0.748

-0.253

Rv3684ko

0.242

-0.468

delta_otsA_trehalose

1.166

1.189