Top 10 genes with highest correlation to Rv3087/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1135c/PPE16 | (cc=0.5028) | info on Rv1135c/PPE16 |
Rv0992c/- | (cc=0.4877) | info on Rv0992c/- |
Rv1969/mce3D | (cc=0.4801) | info on Rv1969/mce3D |
Rv1071c/echA9 | (cc=0.4784) | info on Rv1071c/echA9 |
Rv2287/yjcE | (cc=0.4766) | info on Rv2287/yjcE |
Rv3180c/- | (cc=0.462) | info on Rv3180c/- |
Rv1735c/- | (cc=0.4451) | info on Rv1735c/- |
Rv0687/- | (cc=0.4407) | info on Rv0687/- |
Rv3056/dinP | (cc=0.4304) | info on Rv3056/dinP |
Rv1356c/- | (cc=0.4296) | info on Rv1356c/- |
Correlation of Rv3087/- with Rv1135c/PPE16
Normalized LFCs for Rv3087/-:
(description and provenance of datasets)
Rv3087/- | Rv1135c/PPE16 | |
Fe_supp_jason_reseq | -1.351 | -0.655 |
low_pH_jason_reseq | -1.103 | -1.094 |
NO_jason_reseq | 0.176 | -0.551 |
B6_jason_reseq | -0.435 | -0.13 |
MHCII_jason_reseq | -0.358 | 0.093 |
Isoniazid02 | 0.074 | 0.362 |
Rifampicin4 | 1.118 | 1.075 |
Ethambutol3 | -0.109 | 0.67 |
Meropenem3 | 0.728 | 0.718 |
Vancomycin16 | 0.414 | 0.846 |
Rv2680_day32 | 0.325 | -0.104 |
H37Rv_KO_MarP | 0.313 | -0.344 |
hypoxia_3wks | -0.989 | -0.65 |
hypoxia_6wks | -1.029 | -0.443 |
glycerol | -0.067 | 0.151 |
cholesterol | -0.019 | 0.101 |
AJ | -0.237 | 0.402 |
Bibs02 | -1.111 | 0.646 |
Bibs02c | -0.183 | 0.382 |
BL6 | -0.155 | -0.562 |
BL6a | -0.364 | -0.37 |
BXD01 | -0.47 | -0.218 |
BXD010 | -0.855 | -0.642 |
BXD011 | -0.982 | -0.181 |
BXD03 | -0.347 | -0.455 |
BXD04 | -0.358 | -0.192 |
BXD05 | -0.473 | 0.289 |
BXD06 | -0.78 | -0.469 |
BXD07 | -0.794 | -0.111 |
BXD08 | 0.147 | -0.267 |
BXD09 | -0.759 | -0.472 |
CAST | -0.853 | -0.103 |
CCcont | -0.682 | -1.193 |
DS01 | -0.207 | 0.26 |
DS02 | 0.583 | 0.365 |
DS04 | 0.215 | 0.916 |
DS0c | 0.096 | 0.456 |
GP01 | -0.647 | -1.134 |
GP02 | -0.068 | 0.087 |
GP0c | -0.096 | -0.64 |
NOD | 0.249 | 0.202 |
NZO | -0.12 | -0.373 |
PWK | -0.637 | 0.429 |
H37Rv_KO_CtpC | 0.507 | 0.187 |
H37Rv_KO_CtpD | -0.325 | 0.473 |
H37Rv_KO_Rv1272 | -0.175 | 0.315 |
H37Rv_KO_SugABC | 0.013 | -0.288 |
H37Rv_KO_MbtN | -0.502 | 0.098 |
Trans05 | 0.557 | 0.446 |
macrophage_unactivated | -0.208 | -0.48 |
IL1 | -1.284 | -1.017 |
Rapamycin | -1.418 | -0.644 |
Tcell | 1.166 | -0.111 |
GMCSF | -1.378 | -0.528 |
IFNab | -1.179 | -0.91 |
IFNg | -0.297 | -1.28 |
IFNg_GMCSF1 | -0.207 | -0.305 |
Rv1432_day32 | -0.383 | 0.343 |
Rv1565c_day32 | 0.896 | 0.253 |
secA2_input | 0.762 | -0.437 |
delta_Rv3594 | 0.127 | 0.395 |
delta_Rv3717 | 0.374 | 0.257 |
delta_Rv3811 | 0.626 | 0.031 |
delta_Rv0954 | 0.521 | 0.72 |
PonA1 | 0.496 | 0.128 |
EccD1_KO | 0.217 | 0.658 |
EspI_KO | 0.157 | 0.456 |
PE35_KO | -0.268 | 0.939 |
PPE68_KO | -0.074 | 0.761 |
glycerol2 | -0.503 | -0.566 |
lignocerate | -0.108 | -0.252 |
oleate | -0.493 | -0.313 |
phosphatidylcholine | -0.176 | -0.115 |
acetate | -0.256 | -0.411 |
glucAc | -0.282 | -0.255 |
Rv0950ko | -0.944 | -0.211 |
Rv1096ko | 0.133 | -0.211 |
Rv3684ko | -0.187 | -0.783 |
delta_otsA_trehalose | -0.042 | -0.926 |