Top 10 genes with highest correlation to Rv3039c/echA17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0781/ptrBa | (cc=0.4406) | info on Rv0781/ptrBa |
| Rv0427c/xthA | (cc=0.4258) | info on Rv0427c/xthA |
| Rv0948c/- | (cc=0.423) | info on Rv0948c/- |
| Rv1114/vapC32 | (cc=0.4088) | info on Rv1114/vapC32 |
| Rv2767c/- | (cc=0.4001) | info on Rv2767c/- |
| Rv2290/lppO | (cc=0.3994) | info on Rv2290/lppO |
| Rv1869c/- | (cc=0.3929) | info on Rv1869c/- |
| Rv1233c/- | (cc=0.3912) | info on Rv1233c/- |
| Rv0553/menC | (cc=0.3836) | info on Rv0553/menC |
| Rv3189/- | (cc=0.3816) | info on Rv3189/- |
Correlation of Rv3039c/echA17 with Rv0948c/-
Normalized LFCs for Rv3039c/echA17:
(description and provenance of datasets)
| Rv3039c/echA17 | Rv0948c/- | |
| Fe_supp_jason_reseq | -0.923 | 0.268 |
| low_pH_jason_reseq | -2.652 | -1.134 |
| NO_jason_reseq | 0.457 | -1.089 |
| B6_jason_reseq | 0.461 | 0.097 |
| MHCII_jason_reseq | 1.475 | 1.976 |
| Isoniazid02 | 0.767 | -0.637 |
| Rifampicin4 | -1.202 | -0.601 |
| Ethambutol3 | 0.0 | -0.13 |
| Meropenem3 | 0.146 | -0.173 |
| Vancomycin16 | -0.231 | -0.284 |
| Rv2680_day32 | 2.205 | 0.0 |
| H37Rv_KO_MarP | 0.363 | -0.521 |
| hypoxia_3wks | -0.128 | 0.451 |
| hypoxia_6wks | 0.37 | 1.439 |
| glycerol | -1.24 | -0.897 |
| cholesterol | 0.233 | -0.398 |
| AJ | 0.938 | -0.096 |
| Bibs02 | -1.325 | -1.183 |
| Bibs02c | 1.69 | -1.203 |
| BL6 | 0.321 | 0.496 |
| BL6a | 2.177 | 0.555 |
| BXD01 | 0.242 | 0.516 |
| BXD010 | 1.779 | 1.027 |
| BXD011 | 1.263 | 2.709 |
| BXD03 | 0.0 | 0.536 |
| BXD04 | 0.199 | 0.048 |
| BXD05 | 1.773 | 0.104 |
| BXD06 | 0.824 | 0.734 |
| BXD07 | 1.209 | 1.992 |
| BXD08 | 0.71 | -0.436 |
| BXD09 | 1.425 | 0.869 |
| CAST | 0.254 | -1.49 |
| CCcont | 0.797 | 0.0 |
| DS01 | 1.42 | 0.0 |
| DS02 | -0.572 | -1.251 |
| DS04 | -1.093 | -1.744 |
| DS0c | 0.605 | -2.167 |
| GP01 | -1.322 | -0.986 |
| GP02 | -1.114 | -0.831 |
| GP0c | -1.19 | -0.5 |
| NOD | -0.508 | 0.488 |
| NZO | 0.767 | 1.845 |
| PWK | -0.918 | 1.124 |
| H37Rv_KO_CtpC | -1.729 | 0.299 |
| H37Rv_KO_CtpD | -1.348 | -1.139 |
| H37Rv_KO_Rv1272 | -1.747 | -1.022 |
| H37Rv_KO_SugABC | -0.978 | -0.99 |
| H37Rv_KO_MbtN | -0.747 | -0.832 |
| Trans05 | -1.619 | -1.055 |
| macrophage_unactivated | -0.133 | -0.83 |
| IL1 | 0.356 | -0.472 |
| Rapamycin | 1.126 | 0.439 |
| Tcell | -0.818 | 0.098 |
| GMCSF | 0.705 | 1.7 |
| IFNab | 0.305 | 1.321 |
| IFNg | 0.665 | -0.802 |
| IFNg_GMCSF1 | 0.129 | -0.5 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 1.151 | 0.0 |
| secA2_input | 1.368 | 0.348 |
| delta_Rv3594 | 1.127 | -0.474 |
| delta_Rv3717 | 0.707 | -2.054 |
| delta_Rv3811 | 1.903 | -0.07 |
| delta_Rv0954 | 0.398 | 0.279 |
| PonA1 | -0.56 | -1.324 |
| EccD1_KO | 1.23 | -1.45 |
| EspI_KO | 1.914 | 2.852 |
| PE35_KO | 0.58 | 0.42 |
| PPE68_KO | 1.814 | 0.0 |
| glycerol2 | -0.761 | -0.413 |
| lignocerate | -0.874 | -1.499 |
| oleate | -0.89 | 0.181 |
| phosphatidylcholine | -1.14 | -0.934 |
| acetate | -1.807 | -1.332 |
| glucAc | -0.949 | -2.515 |
| Rv0950ko | -0.112 | 1.33 |
| Rv1096ko | 0.323 | -1.252 |
| Rv3684ko | 0.35 | -2.358 |
| delta_otsA_trehalose | 0.322 | -0.778 |