Top 10 genes with highest correlation to Rv3039c/echA17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0781/ptrBa | (cc=0.4406) | info on Rv0781/ptrBa |
| Rv0427c/xthA | (cc=0.4258) | info on Rv0427c/xthA |
| Rv0948c/- | (cc=0.423) | info on Rv0948c/- |
| Rv1114/vapC32 | (cc=0.4088) | info on Rv1114/vapC32 |
| Rv2767c/- | (cc=0.4001) | info on Rv2767c/- |
| Rv2290/lppO | (cc=0.3994) | info on Rv2290/lppO |
| Rv1869c/- | (cc=0.3929) | info on Rv1869c/- |
| Rv1233c/- | (cc=0.3912) | info on Rv1233c/- |
| Rv0553/menC | (cc=0.3836) | info on Rv0553/menC |
| Rv3189/- | (cc=0.3816) | info on Rv3189/- |
Correlation of Rv3039c/echA17 with Rv0553/menC
Normalized LFCs for Rv3039c/echA17:
(description and provenance of datasets)
| Rv3039c/echA17 | Rv0553/menC | |
| Fe_supp_jason_reseq | -0.923 | -0.706 |
| low_pH_jason_reseq | -2.652 | 1.233 |
| NO_jason_reseq | 0.457 | -0.399 |
| B6_jason_reseq | 0.461 | 0.752 |
| MHCII_jason_reseq | 1.475 | 1.469 |
| Isoniazid02 | 0.767 | 0.127 |
| Rifampicin4 | -1.202 | -1.124 |
| Ethambutol3 | 0.0 | -0.365 |
| Meropenem3 | 0.146 | 0.0 |
| Vancomycin16 | -0.231 | -0.512 |
| Rv2680_day32 | 2.205 | 0.0 |
| H37Rv_KO_MarP | 0.363 | -0.214 |
| hypoxia_3wks | -0.128 | 0.0 |
| hypoxia_6wks | 0.37 | 2.005 |
| glycerol | -1.24 | 0.108 |
| cholesterol | 0.233 | 0.64 |
| AJ | 0.938 | 0.516 |
| Bibs02 | -1.325 | -1.653 |
| Bibs02c | 1.69 | -0.058 |
| BL6 | 0.321 | 1.098 |
| BL6a | 2.177 | 0.98 |
| BXD01 | 0.242 | 0.346 |
| BXD010 | 1.779 | 1.783 |
| BXD011 | 1.263 | 1.415 |
| BXD03 | 0.0 | 2.032 |
| BXD04 | 0.199 | 0.219 |
| BXD05 | 1.773 | -0.38 |
| BXD06 | 0.824 | 0.791 |
| BXD07 | 1.209 | 0.708 |
| BXD08 | 0.71 | 0.588 |
| BXD09 | 1.425 | 0.313 |
| CAST | 0.254 | 0.661 |
| CCcont | 0.797 | -0.926 |
| DS01 | 1.42 | -0.424 |
| DS02 | -0.572 | -1.141 |
| DS04 | -1.093 | 1.21 |
| DS0c | 0.605 | -0.462 |
| GP01 | -1.322 | -1.378 |
| GP02 | -1.114 | -0.932 |
| GP0c | -1.19 | -1.684 |
| NOD | -0.508 | 0.737 |
| NZO | 0.767 | -1.139 |
| PWK | -0.918 | 0.794 |
| H37Rv_KO_CtpC | -1.729 | -1.469 |
| H37Rv_KO_CtpD | -1.348 | -1.526 |
| H37Rv_KO_Rv1272 | -1.747 | -1.968 |
| H37Rv_KO_SugABC | -0.978 | -1.283 |
| H37Rv_KO_MbtN | -0.747 | -0.291 |
| Trans05 | -1.619 | -1.692 |
| macrophage_unactivated | -0.133 | -1.31 |
| IL1 | 0.356 | -1.528 |
| Rapamycin | 1.126 | -0.592 |
| Tcell | -0.818 | -1.512 |
| GMCSF | 0.705 | -0.734 |
| IFNab | 0.305 | -0.339 |
| IFNg | 0.665 | -0.516 |
| IFNg_GMCSF1 | 0.129 | -0.735 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 1.151 | -0.905 |
| secA2_input | 1.368 | -0.362 |
| delta_Rv3594 | 1.127 | 1.366 |
| delta_Rv3717 | 0.707 | 0.555 |
| delta_Rv3811 | 1.903 | -0.721 |
| delta_Rv0954 | 0.398 | 2.048 |
| PonA1 | -0.56 | 0.223 |
| EccD1_KO | 1.23 | -0.605 |
| EspI_KO | 1.914 | 1.831 |
| PE35_KO | 0.58 | -1.155 |
| PPE68_KO | 1.814 | -1.03 |
| glycerol2 | -0.761 | -1.618 |
| lignocerate | -0.874 | -1.329 |
| oleate | -0.89 | -1.004 |
| phosphatidylcholine | -1.14 | -1.528 |
| acetate | -1.807 | -1.342 |
| glucAc | -0.949 | -1.868 |
| Rv0950ko | -0.112 | 1.668 |
| Rv1096ko | 0.323 | 2.223 |
| Rv3684ko | 0.35 | 2.6 |
| delta_otsA_trehalose | 0.322 | 2.397 |