Top 10 genes with highest correlation to Rv3039c/echA17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0781/ptrBa | (cc=0.4406) | info on Rv0781/ptrBa |
| Rv0427c/xthA | (cc=0.4258) | info on Rv0427c/xthA |
| Rv0948c/- | (cc=0.423) | info on Rv0948c/- |
| Rv1114/vapC32 | (cc=0.4088) | info on Rv1114/vapC32 |
| Rv2767c/- | (cc=0.4001) | info on Rv2767c/- |
| Rv2290/lppO | (cc=0.3994) | info on Rv2290/lppO |
| Rv1869c/- | (cc=0.3929) | info on Rv1869c/- |
| Rv1233c/- | (cc=0.3912) | info on Rv1233c/- |
| Rv0553/menC | (cc=0.3836) | info on Rv0553/menC |
| Rv3189/- | (cc=0.3816) | info on Rv3189/- |
Correlation of Rv3039c/echA17 with Rv0781/ptrBa
Normalized LFCs for Rv3039c/echA17:
(description and provenance of datasets)
| Rv3039c/echA17 | Rv0781/ptrBa | |
| Fe_supp_jason_reseq | -0.923 | -0.268 |
| low_pH_jason_reseq | -2.652 | 0.0 |
| NO_jason_reseq | 0.457 | -0.291 |
| B6_jason_reseq | 0.461 | 0.921 |
| MHCII_jason_reseq | 1.475 | 0.84 |
| Isoniazid02 | 0.767 | 0.0 |
| Rifampicin4 | -1.202 | 0.236 |
| Ethambutol3 | 0.0 | -0.113 |
| Meropenem3 | 0.146 | -0.231 |
| Vancomycin16 | -0.231 | 0.451 |
| Rv2680_day32 | 2.205 | 0.855 |
| H37Rv_KO_MarP | 0.363 | 0.865 |
| hypoxia_3wks | -0.128 | 0.558 |
| hypoxia_6wks | 0.37 | -0.257 |
| glycerol | -1.24 | -0.584 |
| cholesterol | 0.233 | 0.24 |
| AJ | 0.938 | 0.524 |
| Bibs02 | -1.325 | 0.413 |
| Bibs02c | 1.69 | -0.706 |
| BL6 | 0.321 | 1.035 |
| BL6a | 2.177 | 1.128 |
| BXD01 | 0.242 | 1.199 |
| BXD010 | 1.779 | 0.588 |
| BXD011 | 1.263 | 1.902 |
| BXD03 | 0.0 | 0.852 |
| BXD04 | 0.199 | 1.888 |
| BXD05 | 1.773 | 0.794 |
| BXD06 | 0.824 | 1.014 |
| BXD07 | 1.209 | 1.355 |
| BXD08 | 0.71 | 1.321 |
| BXD09 | 1.425 | 1.663 |
| CAST | 0.254 | 0.651 |
| CCcont | 0.797 | 1.082 |
| DS01 | 1.42 | -0.27 |
| DS02 | -0.572 | -0.629 |
| DS04 | -1.093 | -0.967 |
| DS0c | 0.605 | 0.786 |
| GP01 | -1.322 | -1.099 |
| GP02 | -1.114 | -0.843 |
| GP0c | -1.19 | -1.091 |
| NOD | -0.508 | 0.441 |
| NZO | 0.767 | 1.296 |
| PWK | -0.918 | 1.623 |
| H37Rv_KO_CtpC | -1.729 | -0.06 |
| H37Rv_KO_CtpD | -1.348 | 1.006 |
| H37Rv_KO_Rv1272 | -1.747 | -0.219 |
| H37Rv_KO_SugABC | -0.978 | 0.681 |
| H37Rv_KO_MbtN | -0.747 | -0.865 |
| Trans05 | -1.619 | -0.812 |
| macrophage_unactivated | -0.133 | 1.521 |
| IL1 | 0.356 | -0.163 |
| Rapamycin | 1.126 | -0.439 |
| Tcell | -0.818 | -0.274 |
| GMCSF | 0.705 | 0.14 |
| IFNab | 0.305 | -0.432 |
| IFNg | 0.665 | -0.072 |
| IFNg_GMCSF1 | 0.129 | 0.0 |
| Rv1432_day32 | 0.0 | 0.445 |
| Rv1565c_day32 | 1.151 | -0.199 |
| secA2_input | 1.368 | -1.263 |
| delta_Rv3594 | 1.127 | 0.702 |
| delta_Rv3717 | 0.707 | 0.81 |
| delta_Rv3811 | 1.903 | 1.276 |
| delta_Rv0954 | 0.398 | 0.506 |
| PonA1 | -0.56 | 0.0 |
| EccD1_KO | 1.23 | -0.171 |
| EspI_KO | 1.914 | 0.676 |
| PE35_KO | 0.58 | 0.0 |
| PPE68_KO | 1.814 | 0.0 |
| glycerol2 | -0.761 | -2.413 |
| lignocerate | -0.874 | -2.233 |
| oleate | -0.89 | -2.633 |
| phosphatidylcholine | -1.14 | -2.323 |
| acetate | -1.807 | -2.592 |
| glucAc | -0.949 | -0.911 |
| Rv0950ko | -0.112 | 0.458 |
| Rv1096ko | 0.323 | 0.347 |
| Rv3684ko | 0.35 | 0.498 |
| delta_otsA_trehalose | 0.322 | -1.892 |