Top 10 genes with highest correlation to Rv3019c/esxR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1916/aceAb | (cc=0.5761) | info on Rv1916/aceAb |
| Rv2636/- | (cc=0.5641) | info on Rv2636/- |
| Rv1316c/ogt | (cc=0.563) | info on Rv1316c/ogt |
| Rv3554/fdxB | (cc=0.5183) | info on Rv3554/fdxB |
| Rv3295/- | (cc=0.5122) | info on Rv3295/- |
| Rv0488/- | (cc=0.5112) | info on Rv0488/- |
| Rv1997/ctpF | (cc=0.5078) | info on Rv1997/ctpF |
| Rv1894c/- | (cc=0.4965) | info on Rv1894c/- |
| Rv0836c/- | (cc=0.4843) | info on Rv0836c/- |
| Rv0849/- | (cc=0.4841) | info on Rv0849/- |
Correlation of Rv3019c/esxR with Rv1916/aceAb
Normalized LFCs for Rv3019c/esxR:
(description and provenance of datasets)
| Rv3019c/esxR | Rv1916/aceAb | |
| Fe_supp_jason_reseq | -0.415 | -0.188 |
| low_pH_jason_reseq | 0.269 | -0.532 |
| NO_jason_reseq | 0.163 | 0.0 |
| B6_jason_reseq | 0.439 | 0.676 |
| MHCII_jason_reseq | 1.07 | 0.767 |
| Isoniazid02 | -0.84 | -1.4 |
| Rifampicin4 | -0.087 | 0.468 |
| Ethambutol3 | -0.59 | -1.89 |
| Meropenem3 | -0.642 | -1.194 |
| Vancomycin16 | -0.472 | -0.873 |
| Rv2680_day32 | -0.285 | -0.093 |
| H37Rv_KO_MarP | -0.658 | -0.478 |
| hypoxia_3wks | 0.052 | -0.367 |
| hypoxia_6wks | -0.155 | 0.474 |
| glycerol | 0.007 | -0.622 |
| cholesterol | 0.272 | -0.116 |
| AJ | 0.608 | -0.203 |
| Bibs02 | 0.083 | -0.381 |
| Bibs02c | 0.149 | 0.314 |
| BL6 | -0.494 | -1.125 |
| BL6a | -0.11 | -0.056 |
| BXD01 | -0.348 | -0.389 |
| BXD010 | -0.158 | -1.383 |
| BXD011 | -0.135 | -0.266 |
| BXD03 | -0.489 | -0.088 |
| BXD04 | -0.414 | -0.887 |
| BXD05 | -0.354 | -0.575 |
| BXD06 | -0.49 | -0.424 |
| BXD07 | -0.712 | -0.375 |
| BXD08 | 0.227 | -0.473 |
| BXD09 | -0.778 | -0.913 |
| CAST | 0.454 | 0.11 |
| CCcont | -0.677 | -1.499 |
| DS01 | 0.428 | 0.383 |
| DS02 | 0.131 | 0.26 |
| DS04 | 0.117 | -0.055 |
| DS0c | 0.456 | 0.442 |
| GP01 | 0.139 | -0.555 |
| GP02 | -0.488 | 0.411 |
| GP0c | -0.492 | -0.583 |
| NOD | -0.153 | 0.0 |
| NZO | 0.178 | 0.175 |
| PWK | -0.467 | 0.443 |
| H37Rv_KO_CtpC | -0.561 | -0.425 |
| H37Rv_KO_CtpD | 0.543 | 0.9 |
| H37Rv_KO_Rv1272 | 0.265 | 0.54 |
| H37Rv_KO_SugABC | -0.581 | 0.041 |
| H37Rv_KO_MbtN | 0.062 | 0.38 |
| Trans05 | 0.37 | 0.172 |
| macrophage_unactivated | -0.685 | -0.524 |
| IL1 | -0.831 | -0.839 |
| Rapamycin | -0.562 | -1.559 |
| Tcell | -0.707 | -0.44 |
| GMCSF | 0.533 | 0.75 |
| IFNab | -0.955 | -1.07 |
| IFNg | -1.024 | -0.444 |
| IFNg_GMCSF1 | 0.405 | 0.088 |
| Rv1432_day32 | -0.259 | -0.171 |
| Rv1565c_day32 | 0.0 | -0.123 |
| secA2_input | 0.117 | 0.279 |
| delta_Rv3594 | -0.502 | 0.057 |
| delta_Rv3717 | -0.861 | -0.491 |
| delta_Rv3811 | -0.1 | 0.491 |
| delta_Rv0954 | 0.371 | -0.14 |
| PonA1 | -0.222 | -0.366 |
| EccD1_KO | -0.335 | 0.122 |
| EspI_KO | 0.493 | 0.625 |
| PE35_KO | 0.242 | 1.482 |
| PPE68_KO | 0.224 | 1.187 |
| glycerol2 | 0.483 | 0.248 |
| lignocerate | 0.406 | -0.304 |
| oleate | 0.637 | 0.861 |
| phosphatidylcholine | 0.66 | 0.5 |
| acetate | -0.254 | -0.608 |
| glucAc | -0.04 | -0.965 |
| Rv0950ko | 1.176 | -0.479 |
| Rv1096ko | -0.109 | -1.556 |
| Rv3684ko | -0.118 | -1.032 |
| delta_otsA_trehalose | 0.374 | 1.49 |