Top 10 genes with highest correlation to Rv3002c/ilvN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2956/- | (cc=0.4482) | info on Rv2956/- |
| Rv0531/- | (cc=0.4354) | info on Rv0531/- |
| Rv2690c/- | (cc=0.3855) | info on Rv2690c/- |
| Rv1512/epiA | (cc=0.3578) | info on Rv1512/epiA |
| Rv3102c/ftsE | (cc=0.3569) | info on Rv3102c/ftsE |
| Rv2174/mptA | (cc=0.3524) | info on Rv2174/mptA |
| Rv1114/vapC32 | (cc=0.3497) | info on Rv1114/vapC32 |
| Rv2798c/- | (cc=0.3438) | info on Rv2798c/- |
| Rv1872c/lldD2 | (cc=0.3273) | info on Rv1872c/lldD2 |
| Rv2221c/glnE | (cc=0.3259) | info on Rv2221c/glnE |
Correlation of Rv3002c/ilvN with Rv1114/vapC32
Normalized LFCs for Rv3002c/ilvN:
(description and provenance of datasets)
| Rv3002c/ilvN | Rv1114/vapC32 | |
| Fe_supp_jason_reseq | 1.339 | 0.69 |
| low_pH_jason_reseq | 0.0 | -1.715 |
| NO_jason_reseq | 0.0 | -1.134 |
| B6_jason_reseq | 0.0 | 1.416 |
| MHCII_jason_reseq | 0.257 | 0.966 |
| Isoniazid02 | -0.183 | 0.7 |
| Rifampicin4 | 0.0 | -0.371 |
| Ethambutol3 | 0.0 | -0.392 |
| Meropenem3 | 0.497 | -0.448 |
| Vancomycin16 | 1.101 | -0.424 |
| Rv2680_day32 | 0.0 | 2.059 |
| H37Rv_KO_MarP | -1.197 | -0.275 |
| hypoxia_3wks | 0.55 | -0.052 |
| hypoxia_6wks | 0.0 | -0.487 |
| glycerol | -0.202 | -0.948 |
| cholesterol | -0.145 | -1.317 |
| AJ | -0.232 | -0.281 |
| Bibs02 | -0.183 | -0.046 |
| Bibs02c | -0.209 | -1.261 |
| BL6 | -0.125 | -1.183 |
| BL6a | 0.181 | -0.641 |
| BXD01 | 0.227 | -1.051 |
| BXD010 | 0.224 | -1.007 |
| BXD011 | -0.127 | 0.189 |
| BXD03 | 2.111 | 0.573 |
| BXD04 | -0.124 | -0.896 |
| BXD05 | 0.0 | -1.693 |
| BXD06 | 0.122 | -0.627 |
| BXD07 | 0.126 | 0.555 |
| BXD08 | 0.0 | 0.18 |
| BXD09 | -0.14 | -0.937 |
| CAST | -0.23 | -0.48 |
| CCcont | -0.149 | -0.33 |
| DS01 | -0.236 | -0.464 |
| DS02 | -0.217 | -1.952 |
| DS04 | 0.489 | -2.507 |
| DS0c | -0.217 | 0.096 |
| GP01 | -0.099 | -0.142 |
| GP02 | -0.083 | -1.4 |
| GP0c | -0.13 | -1.725 |
| NOD | -0.225 | -1.518 |
| NZO | -0.199 | 0.27 |
| PWK | -0.196 | -1.235 |
| H37Rv_KO_CtpC | -0.162 | -1.915 |
| H37Rv_KO_CtpD | -0.127 | -1.078 |
| H37Rv_KO_Rv1272 | -0.141 | -0.729 |
| H37Rv_KO_SugABC | 0.451 | -2.336 |
| H37Rv_KO_MbtN | -0.103 | -0.267 |
| Trans05 | -0.131 | -0.363 |
| macrophage_unactivated | 0.0 | -0.713 |
| IL1 | -0.374 | -1.293 |
| Rapamycin | -0.387 | 0.0 |
| Tcell | -0.857 | -1.453 |
| GMCSF | -0.333 | -0.288 |
| IFNab | 0.973 | 0.206 |
| IFNg | -0.703 | -0.393 |
| IFNg_GMCSF1 | 0.0 | -0.584 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | -0.766 |
| secA2_input | -0.412 | 0.013 |
| delta_Rv3594 | 0.402 | 2.934 |
| delta_Rv3717 | 0.61 | 2.146 |
| delta_Rv3811 | 1.139 | 2.207 |
| delta_Rv0954 | 0.0 | -0.035 |
| PonA1 | 0.0 | 0.502 |
| EccD1_KO | 1.542 | 1.503 |
| EspI_KO | -0.687 | 0.588 |
| PE35_KO | 1.811 | 0.152 |
| PPE68_KO | -0.771 | -0.173 |
| glycerol2 | 0.0 | 0.052 |
| lignocerate | 0.0 | -0.145 |
| oleate | 0.0 | -1.117 |
| phosphatidylcholine | 0.0 | -0.522 |
| acetate | 0.0 | -1.17 |
| glucAc | 0.0 | 0.348 |
| Rv0950ko | -0.482 | -2.093 |
| Rv1096ko | -0.483 | -1.252 |
| Rv3684ko | -0.524 | -2.558 |
| delta_otsA_trehalose | 0.0 | 1.382 |