Top 10 genes with highest correlation to Rv2993c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0181c/- | (cc=0.6484) | info on Rv0181c/- |
| Rv1336/cysM | (cc=0.6061) | info on Rv1336/cysM |
| Rv2842c/- | (cc=0.5832) | info on Rv2842c/- |
| Rv3419c/gcp | (cc=0.5661) | info on Rv3419c/gcp |
| Rv0668/rpoC | (cc=0.5632) | info on Rv0668/rpoC |
| Rv0505c/serB1 | (cc=0.5557) | info on Rv0505c/serB1 |
| Rv0049/- | (cc=0.5512) | info on Rv0049/- |
| Rv2683/- | (cc=0.5507) | info on Rv2683/- |
| Rv3842c/glpQ1 | (cc=0.5452) | info on Rv3842c/glpQ1 |
| Rv2243/fabD | (cc=0.5429) | info on Rv2243/fabD |
Correlation of Rv2993c/- with Rv2842c/-
Normalized LFCs for Rv2993c/-:
(description and provenance of datasets)
| Rv2993c/- | Rv2842c/- | |
| Fe_supp_jason_reseq | 0.137 | -3.443 |
| low_pH_jason_reseq | 0.539 | 1.691 |
| NO_jason_reseq | 2.119 | 1.486 |
| B6_jason_reseq | -0.14 | -1.81 |
| MHCII_jason_reseq | -1.64 | -2.409 |
| Isoniazid02 | -0.067 | 0.156 |
| Rifampicin4 | 0.236 | 1.27 |
| Ethambutol3 | -0.658 | 1.282 |
| Meropenem3 | -0.728 | -0.289 |
| Vancomycin16 | -0.377 | 1.027 |
| Rv2680_day32 | -0.131 | 1.583 |
| H37Rv_KO_MarP | 0.603 | 0.563 |
| hypoxia_3wks | -0.108 | -1.132 |
| hypoxia_6wks | 1.681 | -1.879 |
| glycerol | 0.295 | -0.184 |
| cholesterol | 0.454 | -0.132 |
| AJ | -1.681 | -0.442 |
| Bibs02 | -0.201 | -0.348 |
| Bibs02c | -0.629 | -0.399 |
| BL6 | -0.376 | 2.496 |
| BL6a | 3.675 | 3.075 |
| BXD01 | 3.877 | 2.362 |
| BXD010 | 3.281 | 2.261 |
| BXD011 | 5.19 | 2.526 |
| BXD03 | 2.76 | 2.982 |
| BXD04 | 3.792 | 1.383 |
| BXD05 | 3.478 | 2.834 |
| BXD06 | 4.577 | 3.053 |
| BXD07 | 5.227 | 2.177 |
| BXD08 | 2.864 | 3.592 |
| BXD09 | 3.938 | 1.44 |
| CAST | 0.894 | 1.458 |
| CCcont | 0.41 | 2.376 |
| DS01 | -0.4 | -0.216 |
| DS02 | -0.117 | 0.0 |
| DS04 | 0.098 | 0.707 |
| DS0c | -0.809 | -0.413 |
| GP01 | -0.715 | -0.188 |
| GP02 | -0.444 | -0.159 |
| GP0c | -0.942 | -0.248 |
| NOD | -0.12 | -0.205 |
| NZO | -0.897 | -0.38 |
| PWK | 0.374 | -0.179 |
| H37Rv_KO_CtpC | 0.238 | 1.957 |
| H37Rv_KO_CtpD | 1.103 | 0.204 |
| H37Rv_KO_Rv1272 | 1.929 | -0.269 |
| H37Rv_KO_SugABC | -0.718 | 2.45 |
| H37Rv_KO_MbtN | 0.719 | 0.0 |
| Trans05 | 0.764 | 1.296 |
| macrophage_unactivated | -0.843 | -2.14 |
| IL1 | -1.296 | -2.791 |
| Rapamycin | -0.353 | -1.936 |
| Tcell | 0.795 | -0.857 |
| GMCSF | -3.345 | -2.485 |
| IFNab | -1.146 | -0.381 |
| IFNg | -2.277 | -1.446 |
| IFNg_GMCSF1 | 0.069 | -2.608 |
| Rv1432_day32 | 1.059 | 0.0 |
| Rv1565c_day32 | 0.0 | -0.415 |
| secA2_input | 0.668 | 1.349 |
| delta_Rv3594 | 2.903 | 1.869 |
| delta_Rv3717 | 3.485 | 2.815 |
| delta_Rv3811 | 4.203 | 3.098 |
| delta_Rv0954 | 1.808 | -1.383 |
| PonA1 | 1.726 | -0.799 |
| EccD1_KO | 0.582 | 2.144 |
| EspI_KO | -0.787 | 2.997 |
| PE35_KO | 1.768 | -1.415 |
| PPE68_KO | 2.316 | 0.47 |
| glycerol2 | 0.161 | -0.82 |
| lignocerate | 0.207 | 0.185 |
| oleate | 0.457 | -1.202 |
| phosphatidylcholine | 0.451 | -0.508 |
| acetate | 0.495 | 1.303 |
| glucAc | -0.701 | 0.762 |
| Rv0950ko | -0.844 | -0.482 |
| Rv1096ko | 0.597 | 0.926 |
| Rv3684ko | 0.766 | 2.607 |
| delta_otsA_trehalose | 0.254 | 0.239 |