Top 10 genes with highest correlation to Rv2993c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0181c/- | (cc=0.6484) | info on Rv0181c/- |
| Rv1336/cysM | (cc=0.6061) | info on Rv1336/cysM |
| Rv2842c/- | (cc=0.5832) | info on Rv2842c/- |
| Rv3419c/gcp | (cc=0.5661) | info on Rv3419c/gcp |
| Rv0668/rpoC | (cc=0.5632) | info on Rv0668/rpoC |
| Rv0505c/serB1 | (cc=0.5557) | info on Rv0505c/serB1 |
| Rv0049/- | (cc=0.5512) | info on Rv0049/- |
| Rv2683/- | (cc=0.5507) | info on Rv2683/- |
| Rv3842c/glpQ1 | (cc=0.5452) | info on Rv3842c/glpQ1 |
| Rv2243/fabD | (cc=0.5429) | info on Rv2243/fabD |
Correlation of Rv2993c/- with Rv0049/-
Normalized LFCs for Rv2993c/-:
(description and provenance of datasets)
| Rv2993c/- | Rv0049/- | |
| Fe_supp_jason_reseq | 0.137 | 0.404 |
| low_pH_jason_reseq | 0.539 | -0.361 |
| NO_jason_reseq | 2.119 | 2.237 |
| B6_jason_reseq | -0.14 | 2.761 |
| MHCII_jason_reseq | -1.64 | 1.686 |
| Isoniazid02 | -0.067 | -4.265 |
| Rifampicin4 | 0.236 | -2.889 |
| Ethambutol3 | -0.658 | -4.182 |
| Meropenem3 | -0.728 | -1.01 |
| Vancomycin16 | -0.377 | -6.0 |
| Rv2680_day32 | -0.131 | -1.252 |
| H37Rv_KO_MarP | 0.603 | -5.444 |
| hypoxia_3wks | -0.108 | -0.546 |
| hypoxia_6wks | 1.681 | -1.334 |
| glycerol | 0.295 | 0.774 |
| cholesterol | 0.454 | 1.774 |
| AJ | -1.681 | 0.889 |
| Bibs02 | -0.201 | -2.229 |
| Bibs02c | -0.629 | -0.308 |
| BL6 | -0.376 | 1.028 |
| BL6a | 3.675 | 2.627 |
| BXD01 | 3.877 | 2.217 |
| BXD010 | 3.281 | 2.728 |
| BXD011 | 5.19 | 4.652 |
| BXD03 | 2.76 | 3.087 |
| BXD04 | 3.792 | 2.028 |
| BXD05 | 3.478 | 3.906 |
| BXD06 | 4.577 | 4.436 |
| BXD07 | 5.227 | 4.021 |
| BXD08 | 2.864 | 2.172 |
| BXD09 | 3.938 | 2.471 |
| CAST | 0.894 | -1.203 |
| CCcont | 0.41 | 2.649 |
| DS01 | -0.4 | -1.921 |
| DS02 | -0.117 | -2.774 |
| DS04 | 0.098 | 0.575 |
| DS0c | -0.809 | -2.211 |
| GP01 | -0.715 | 1.773 |
| GP02 | -0.444 | 2.935 |
| GP0c | -0.942 | 3.495 |
| NOD | -0.12 | -1.515 |
| NZO | -0.897 | 1.376 |
| PWK | 0.374 | 3.436 |
| H37Rv_KO_CtpC | 0.238 | 1.75 |
| H37Rv_KO_CtpD | 1.103 | -1.411 |
| H37Rv_KO_Rv1272 | 1.929 | 2.554 |
| H37Rv_KO_SugABC | -0.718 | 2.361 |
| H37Rv_KO_MbtN | 0.719 | 4.289 |
| Trans05 | 0.764 | 1.424 |
| macrophage_unactivated | -0.843 | 0.268 |
| IL1 | -1.296 | 1.092 |
| Rapamycin | -0.353 | -0.42 |
| Tcell | 0.795 | 2.9 |
| GMCSF | -3.345 | -2.044 |
| IFNab | -1.146 | -1.811 |
| IFNg | -2.277 | 0.043 |
| IFNg_GMCSF1 | 0.069 | -0.949 |
| Rv1432_day32 | 1.059 | 4.133 |
| Rv1565c_day32 | 0.0 | 0.218 |
| secA2_input | 0.668 | 2.224 |
| delta_Rv3594 | 2.903 | 6.0 |
| delta_Rv3717 | 3.485 | 6.0 |
| delta_Rv3811 | 4.203 | 5.737 |
| delta_Rv0954 | 1.808 | 4.229 |
| PonA1 | 1.726 | 1.526 |
| EccD1_KO | 0.582 | -0.763 |
| EspI_KO | -0.787 | -0.257 |
| PE35_KO | 1.768 | -1.062 |
| PPE68_KO | 2.316 | 0.47 |
| glycerol2 | 0.161 | 0.227 |
| lignocerate | 0.207 | -1.453 |
| oleate | 0.457 | -1.11 |
| phosphatidylcholine | 0.451 | -1.426 |
| acetate | 0.495 | 0.347 |
| glucAc | -0.701 | 0.216 |
| Rv0950ko | -0.844 | -0.461 |
| Rv1096ko | 0.597 | 0.308 |
| Rv3684ko | 0.766 | 1.618 |
| delta_otsA_trehalose | 0.254 | -0.75 |