Top 10 genes with highest correlation to Rv2993c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0181c/- | (cc=0.6484) | info on Rv0181c/- |
| Rv1336/cysM | (cc=0.6061) | info on Rv1336/cysM |
| Rv2842c/- | (cc=0.5832) | info on Rv2842c/- |
| Rv3419c/gcp | (cc=0.5661) | info on Rv3419c/gcp |
| Rv0668/rpoC | (cc=0.5632) | info on Rv0668/rpoC |
| Rv0505c/serB1 | (cc=0.5557) | info on Rv0505c/serB1 |
| Rv0049/- | (cc=0.5512) | info on Rv0049/- |
| Rv2683/- | (cc=0.5507) | info on Rv2683/- |
| Rv3842c/glpQ1 | (cc=0.5452) | info on Rv3842c/glpQ1 |
| Rv2243/fabD | (cc=0.5429) | info on Rv2243/fabD |
Correlation of Rv2993c/- with Rv1336/cysM
Normalized LFCs for Rv2993c/-:
(description and provenance of datasets)
| Rv2993c/- | Rv1336/cysM | |
| Fe_supp_jason_reseq | 0.137 | 0.199 |
| low_pH_jason_reseq | 0.539 | 0.831 |
| NO_jason_reseq | 2.119 | 1.113 |
| B6_jason_reseq | -0.14 | 0.705 |
| MHCII_jason_reseq | -1.64 | -0.079 |
| Isoniazid02 | -0.067 | 1.385 |
| Rifampicin4 | 0.236 | 0.076 |
| Ethambutol3 | -0.658 | -0.593 |
| Meropenem3 | -0.728 | 0.628 |
| Vancomycin16 | -0.377 | 0.666 |
| Rv2680_day32 | -0.131 | 0.675 |
| H37Rv_KO_MarP | 0.603 | -0.425 |
| hypoxia_3wks | -0.108 | 2.213 |
| hypoxia_6wks | 1.681 | 4.042 |
| glycerol | 0.295 | -0.967 |
| cholesterol | 0.454 | 0.048 |
| AJ | -1.681 | -1.56 |
| Bibs02 | -0.201 | -1.444 |
| Bibs02c | -0.629 | -1.203 |
| BL6 | -0.376 | 1.43 |
| BL6a | 3.675 | 1.05 |
| BXD01 | 3.877 | 2.221 |
| BXD010 | 3.281 | 1.974 |
| BXD011 | 5.19 | 3.102 |
| BXD03 | 2.76 | 1.156 |
| BXD04 | 3.792 | 1.994 |
| BXD05 | 3.478 | 1.724 |
| BXD06 | 4.577 | 2.328 |
| BXD07 | 5.227 | 2.6 |
| BXD08 | 2.864 | 2.71 |
| BXD09 | 3.938 | 1.771 |
| CAST | 0.894 | -0.594 |
| CCcont | 0.41 | 0.248 |
| DS01 | -0.4 | -1.632 |
| DS02 | -0.117 | -1.306 |
| DS04 | 0.098 | -0.136 |
| DS0c | -0.809 | -1.194 |
| GP01 | -0.715 | 1.134 |
| GP02 | -0.444 | 0.251 |
| GP0c | -0.942 | 1.595 |
| NOD | -0.12 | -1.128 |
| NZO | -0.897 | 0.23 |
| PWK | 0.374 | -0.469 |
| H37Rv_KO_CtpC | 0.238 | -0.578 |
| H37Rv_KO_CtpD | 1.103 | 0.006 |
| H37Rv_KO_Rv1272 | 1.929 | 1.298 |
| H37Rv_KO_SugABC | -0.718 | 0.836 |
| H37Rv_KO_MbtN | 0.719 | 2.209 |
| Trans05 | 0.764 | 1.733 |
| macrophage_unactivated | -0.843 | -2.061 |
| IL1 | -1.296 | -0.163 |
| Rapamycin | -0.353 | -0.915 |
| Tcell | 0.795 | 0.29 |
| GMCSF | -3.345 | -1.428 |
| IFNab | -1.146 | 0.115 |
| IFNg | -2.277 | -0.901 |
| IFNg_GMCSF1 | 0.069 | -1.024 |
| Rv1432_day32 | 1.059 | 0.846 |
| Rv1565c_day32 | 0.0 | -1.439 |
| secA2_input | 0.668 | 0.227 |
| delta_Rv3594 | 2.903 | 0.858 |
| delta_Rv3717 | 3.485 | 2.129 |
| delta_Rv3811 | 4.203 | 1.103 |
| delta_Rv0954 | 1.808 | -0.291 |
| PonA1 | 1.726 | -0.995 |
| EccD1_KO | 0.582 | 0.22 |
| EspI_KO | -0.787 | 0.088 |
| PE35_KO | 1.768 | -0.715 |
| PPE68_KO | 2.316 | 0.016 |
| glycerol2 | 0.161 | -0.206 |
| lignocerate | 0.207 | -2.133 |
| oleate | 0.457 | 2.606 |
| phosphatidylcholine | 0.451 | -1.732 |
| acetate | 0.495 | -0.073 |
| glucAc | -0.701 | -0.255 |
| Rv0950ko | -0.844 | -0.633 |
| Rv1096ko | 0.597 | -0.305 |
| Rv3684ko | 0.766 | 0.308 |
| delta_otsA_trehalose | 0.254 | -0.053 |