Top 10 genes with highest correlation to Rv2955c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2293c/- | (cc=0.5756) | info on Rv2293c/- |
| Rv1869c/- | (cc=0.5335) | info on Rv1869c/- |
| Rv2367c/- | (cc=0.5117) | info on Rv2367c/- |
| Rv2867c/- | (cc=0.4896) | info on Rv2867c/- |
| Rv1251c/- | (cc=0.4841) | info on Rv1251c/- |
| Rv2041c/- | (cc=0.4663) | info on Rv2041c/- |
| Rv2303c/- | (cc=0.4461) | info on Rv2303c/- |
| Rv3479/- | (cc=0.4372) | info on Rv3479/- |
| Rv0149/- | (cc=0.4276) | info on Rv0149/- |
| Rv0990c/- | (cc=0.4227) | info on Rv0990c/- |
Correlation of Rv2955c/- with Rv2867c/-
Normalized LFCs for Rv2955c/-:
(description and provenance of datasets)
| Rv2955c/- | Rv2867c/- | |
| Fe_supp_jason_reseq | -0.931 | -0.286 |
| low_pH_jason_reseq | 0.649 | 1.094 |
| NO_jason_reseq | -0.026 | 2.919 |
| B6_jason_reseq | -0.206 | -0.311 |
| MHCII_jason_reseq | 0.575 | 1.83 |
| Isoniazid02 | 0.185 | -0.188 |
| Rifampicin4 | 0.644 | 0.712 |
| Ethambutol3 | 0.66 | -0.371 |
| Meropenem3 | 2.825 | 4.582 |
| Vancomycin16 | 0.162 | 0.759 |
| Rv2680_day32 | -0.117 | -0.52 |
| H37Rv_KO_MarP | -0.063 | 0.44 |
| hypoxia_3wks | 0.251 | -0.219 |
| hypoxia_6wks | 0.0 | -0.299 |
| glycerol | 0.87 | 1.701 |
| cholesterol | 0.101 | 1.109 |
| AJ | 0.511 | 1.257 |
| Bibs02 | 0.576 | 0.093 |
| Bibs02c | -0.189 | 0.47 |
| BL6 | -0.258 | -0.543 |
| BL6a | -0.118 | -0.218 |
| BXD01 | 0.396 | -0.629 |
| BXD010 | 0.326 | -0.265 |
| BXD011 | -0.417 | -0.533 |
| BXD03 | -0.08 | -0.058 |
| BXD04 | 0.509 | 0.48 |
| BXD05 | 0.256 | -0.975 |
| BXD06 | -0.059 | -0.086 |
| BXD07 | -0.071 | -0.646 |
| BXD08 | 0.541 | 0.582 |
| BXD09 | -0.01 | -0.852 |
| CAST | -0.102 | 2.399 |
| CCcont | -0.183 | 0.231 |
| DS01 | -0.233 | 2.024 |
| DS02 | 0.454 | 1.482 |
| DS04 | 0.096 | 1.258 |
| DS0c | 0.181 | 1.419 |
| GP01 | -0.893 | -0.895 |
| GP02 | 0.041 | 0.034 |
| GP0c | -0.118 | -1.506 |
| NOD | 0.033 | 1.494 |
| NZO | 0.802 | 1.595 |
| PWK | 0.466 | 2.066 |
| H37Rv_KO_CtpC | 0.091 | -0.758 |
| H37Rv_KO_CtpD | 0.218 | 0.327 |
| H37Rv_KO_Rv1272 | -1.094 | -0.59 |
| H37Rv_KO_SugABC | 0.441 | 1.088 |
| H37Rv_KO_MbtN | 0.547 | -0.125 |
| Trans05 | 0.473 | -0.322 |
| macrophage_unactivated | -0.877 | -1.36 |
| IL1 | 0.107 | 0.323 |
| Rapamycin | -0.169 | -0.473 |
| Tcell | -0.661 | -2.014 |
| GMCSF | -0.048 | -1.439 |
| IFNab | -0.52 | -2.694 |
| IFNg | -0.072 | -1.521 |
| IFNg_GMCSF1 | 0.057 | -0.716 |
| Rv1432_day32 | 0.9 | 1.886 |
| Rv1565c_day32 | -1.208 | 0.67 |
| secA2_input | -0.099 | -0.78 |
| delta_Rv3594 | -0.288 | -0.685 |
| delta_Rv3717 | -0.677 | -1.854 |
| delta_Rv3811 | -0.464 | -0.254 |
| delta_Rv0954 | 0.111 | -1.257 |
| PonA1 | -0.466 | -1.045 |
| EccD1_KO | 0.194 | 0.464 |
| EspI_KO | 1.027 | -0.667 |
| PE35_KO | 0.968 | 0.621 |
| PPE68_KO | 0.937 | -0.045 |
| glycerol2 | -0.722 | -2.123 |
| lignocerate | -0.887 | -0.627 |
| oleate | -0.305 | -0.414 |
| phosphatidylcholine | -0.612 | -2.323 |
| acetate | -1.006 | 1.077 |
| glucAc | -0.933 | 1.944 |
| Rv0950ko | -0.823 | 0.519 |
| Rv1096ko | -0.283 | -0.283 |
| Rv3684ko | -1.307 | -0.308 |
| delta_otsA_trehalose | -0.081 | -0.74 |