Top 10 genes with highest correlation to Rv2955c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2293c/- | (cc=0.5756) | info on Rv2293c/- |
| Rv1869c/- | (cc=0.5335) | info on Rv1869c/- |
| Rv2367c/- | (cc=0.5117) | info on Rv2367c/- |
| Rv2867c/- | (cc=0.4896) | info on Rv2867c/- |
| Rv1251c/- | (cc=0.4841) | info on Rv1251c/- |
| Rv2041c/- | (cc=0.4663) | info on Rv2041c/- |
| Rv2303c/- | (cc=0.4461) | info on Rv2303c/- |
| Rv3479/- | (cc=0.4372) | info on Rv3479/- |
| Rv0149/- | (cc=0.4276) | info on Rv0149/- |
| Rv0990c/- | (cc=0.4227) | info on Rv0990c/- |
Correlation of Rv2955c/- with Rv2367c/-
Normalized LFCs for Rv2955c/-:
(description and provenance of datasets)
| Rv2955c/- | Rv2367c/- | |
| Fe_supp_jason_reseq | -0.931 | -1.653 |
| low_pH_jason_reseq | 0.649 | -0.311 |
| NO_jason_reseq | -0.026 | -0.06 |
| B6_jason_reseq | -0.206 | -1.244 |
| MHCII_jason_reseq | 0.575 | -0.082 |
| Isoniazid02 | 0.185 | 0.437 |
| Rifampicin4 | 0.644 | 0.357 |
| Ethambutol3 | 0.66 | 0.161 |
| Meropenem3 | 2.825 | 1.198 |
| Vancomycin16 | 0.162 | 0.419 |
| Rv2680_day32 | -0.117 | 0.035 |
| H37Rv_KO_MarP | -0.063 | -0.131 |
| hypoxia_3wks | 0.251 | -0.379 |
| hypoxia_6wks | 0.0 | 0.72 |
| glycerol | 0.87 | -0.616 |
| cholesterol | 0.101 | 0.211 |
| AJ | 0.511 | 0.78 |
| Bibs02 | 0.576 | 0.303 |
| Bibs02c | -0.189 | -0.103 |
| BL6 | -0.258 | 0.073 |
| BL6a | -0.118 | -0.227 |
| BXD01 | 0.396 | -1.32 |
| BXD010 | 0.326 | -0.497 |
| BXD011 | -0.417 | -0.29 |
| BXD03 | -0.08 | -0.573 |
| BXD04 | 0.509 | -0.882 |
| BXD05 | 0.256 | -0.227 |
| BXD06 | -0.059 | 0.314 |
| BXD07 | -0.071 | -0.514 |
| BXD08 | 0.541 | -0.516 |
| BXD09 | -0.01 | 0.066 |
| CAST | -0.102 | -0.934 |
| CCcont | -0.183 | -0.092 |
| DS01 | -0.233 | -0.501 |
| DS02 | 0.454 | -1.043 |
| DS04 | 0.096 | -1.337 |
| DS0c | 0.181 | -0.162 |
| GP01 | -0.893 | -0.727 |
| GP02 | 0.041 | -1.472 |
| GP0c | -0.118 | -0.439 |
| NOD | 0.033 | 0.529 |
| NZO | 0.802 | 0.205 |
| PWK | 0.466 | 0.462 |
| H37Rv_KO_CtpC | 0.091 | -0.47 |
| H37Rv_KO_CtpD | 0.218 | -2.086 |
| H37Rv_KO_Rv1272 | -1.094 | -0.759 |
| H37Rv_KO_SugABC | 0.441 | 0.28 |
| H37Rv_KO_MbtN | 0.547 | -1.697 |
| Trans05 | 0.473 | 0.149 |
| macrophage_unactivated | -0.877 | -1.869 |
| IL1 | 0.107 | 0.255 |
| Rapamycin | -0.169 | 0.046 |
| Tcell | -0.661 | -0.453 |
| GMCSF | -0.048 | -0.541 |
| IFNab | -0.52 | -0.52 |
| IFNg | -0.072 | 0.339 |
| IFNg_GMCSF1 | 0.057 | -0.754 |
| Rv1432_day32 | 0.9 | 1.175 |
| Rv1565c_day32 | -1.208 | -1.579 |
| secA2_input | -0.099 | -0.36 |
| delta_Rv3594 | -0.288 | -0.402 |
| delta_Rv3717 | -0.677 | -1.044 |
| delta_Rv3811 | -0.464 | -0.772 |
| delta_Rv0954 | 0.111 | -1.498 |
| PonA1 | -0.466 | 0.504 |
| EccD1_KO | 0.194 | 0.881 |
| EspI_KO | 1.027 | 0.992 |
| PE35_KO | 0.968 | 0.939 |
| PPE68_KO | 0.937 | 1.113 |
| glycerol2 | -0.722 | -1.192 |
| lignocerate | -0.887 | -1.238 |
| oleate | -0.305 | -1.252 |
| phosphatidylcholine | -0.612 | -1.864 |
| acetate | -1.006 | -0.444 |
| glucAc | -0.933 | -0.365 |
| Rv0950ko | -0.823 | 0.256 |
| Rv1096ko | -0.283 | -0.715 |
| Rv3684ko | -1.307 | -1.127 |
| delta_otsA_trehalose | -0.081 | -0.245 |