Top 10 genes with highest correlation to Rv2955c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2293c/- | (cc=0.5756) | info on Rv2293c/- |
| Rv1869c/- | (cc=0.5335) | info on Rv1869c/- |
| Rv2367c/- | (cc=0.5117) | info on Rv2367c/- |
| Rv2867c/- | (cc=0.4896) | info on Rv2867c/- |
| Rv1251c/- | (cc=0.4841) | info on Rv1251c/- |
| Rv2041c/- | (cc=0.4663) | info on Rv2041c/- |
| Rv2303c/- | (cc=0.4461) | info on Rv2303c/- |
| Rv3479/- | (cc=0.4372) | info on Rv3479/- |
| Rv0149/- | (cc=0.4276) | info on Rv0149/- |
| Rv0990c/- | (cc=0.4227) | info on Rv0990c/- |
Correlation of Rv2955c/- with Rv2293c/-
Normalized LFCs for Rv2955c/-:
(description and provenance of datasets)
| Rv2955c/- | Rv2293c/- | |
| Fe_supp_jason_reseq | -0.931 | -0.297 |
| low_pH_jason_reseq | 0.649 | 0.828 |
| NO_jason_reseq | -0.026 | -0.425 |
| B6_jason_reseq | -0.206 | -1.388 |
| MHCII_jason_reseq | 0.575 | -0.586 |
| Isoniazid02 | 0.185 | -0.06 |
| Rifampicin4 | 0.644 | 1.097 |
| Ethambutol3 | 0.66 | 0.187 |
| Meropenem3 | 2.825 | 2.283 |
| Vancomycin16 | 0.162 | 0.735 |
| Rv2680_day32 | -0.117 | 0.169 |
| H37Rv_KO_MarP | -0.063 | 0.979 |
| hypoxia_3wks | 0.251 | 0.255 |
| hypoxia_6wks | 0.0 | 0.067 |
| glycerol | 0.87 | -0.582 |
| cholesterol | 0.101 | -0.302 |
| AJ | 0.511 | 0.237 |
| Bibs02 | 0.576 | 0.356 |
| Bibs02c | -0.189 | 0.956 |
| BL6 | -0.258 | -1.649 |
| BL6a | -0.118 | 0.098 |
| BXD01 | 0.396 | 0.147 |
| BXD010 | 0.326 | -0.297 |
| BXD011 | -0.417 | 0.031 |
| BXD03 | -0.08 | -0.191 |
| BXD04 | 0.509 | -0.366 |
| BXD05 | 0.256 | 0.082 |
| BXD06 | -0.059 | -0.227 |
| BXD07 | -0.071 | -0.247 |
| BXD08 | 0.541 | -0.34 |
| BXD09 | -0.01 | -0.169 |
| CAST | -0.102 | -0.073 |
| CCcont | -0.183 | -2.002 |
| DS01 | -0.233 | -0.284 |
| DS02 | 0.454 | -0.737 |
| DS04 | 0.096 | -0.274 |
| DS0c | 0.181 | -0.572 |
| GP01 | -0.893 | 0.455 |
| GP02 | 0.041 | -0.679 |
| GP0c | -0.118 | 0.14 |
| NOD | 0.033 | 1.404 |
| NZO | 0.802 | -0.171 |
| PWK | 0.466 | 0.502 |
| H37Rv_KO_CtpC | 0.091 | 0.099 |
| H37Rv_KO_CtpD | 0.218 | 0.443 |
| H37Rv_KO_Rv1272 | -1.094 | -0.869 |
| H37Rv_KO_SugABC | 0.441 | 0.14 |
| H37Rv_KO_MbtN | 0.547 | 0.563 |
| Trans05 | 0.473 | -0.138 |
| macrophage_unactivated | -0.877 | 0.193 |
| IL1 | 0.107 | -1.003 |
| Rapamycin | -0.169 | -1.663 |
| Tcell | -0.661 | 0.039 |
| GMCSF | -0.048 | 0.066 |
| IFNab | -0.52 | -0.233 |
| IFNg | -0.072 | -0.102 |
| IFNg_GMCSF1 | 0.057 | 0.449 |
| Rv1432_day32 | 0.9 | 1.358 |
| Rv1565c_day32 | -1.208 | -1.181 |
| secA2_input | -0.099 | -0.999 |
| delta_Rv3594 | -0.288 | 0.485 |
| delta_Rv3717 | -0.677 | 0.474 |
| delta_Rv3811 | -0.464 | 0.248 |
| delta_Rv0954 | 0.111 | 0.274 |
| PonA1 | -0.466 | -0.075 |
| EccD1_KO | 0.194 | 0.638 |
| EspI_KO | 1.027 | 0.847 |
| PE35_KO | 0.968 | 1.28 |
| PPE68_KO | 0.937 | 1.318 |
| glycerol2 | -0.722 | -0.74 |
| lignocerate | -0.887 | -1.249 |
| oleate | -0.305 | 0.21 |
| phosphatidylcholine | -0.612 | -0.48 |
| acetate | -1.006 | -1.599 |
| glucAc | -0.933 | -2.283 |
| Rv0950ko | -0.823 | -1.288 |
| Rv1096ko | -0.283 | -1.411 |
| Rv3684ko | -1.307 | -1.5 |
| delta_otsA_trehalose | -0.081 | 0.771 |