Top 10 genes with highest correlation to Rv2954c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2345/- | (cc=0.5093) | info on Rv2345/- |
Rv3323c/moaX | (cc=0.5085) | info on Rv3323c/moaX |
Rv1981c/nrdF1 | (cc=0.5056) | info on Rv1981c/nrdF1 |
Rv3164c/moxR3 | (cc=0.5047) | info on Rv3164c/moxR3 |
Rv2675c/- | (cc=0.5015) | info on Rv2675c/- |
Rv1175c/fadH | (cc=0.4701) | info on Rv1175c/fadH |
Rv2429/ahpD | (cc=0.4693) | info on Rv2429/ahpD |
Rv2602/vapC41 | (cc=0.4588) | info on Rv2602/vapC41 |
Rv0940c/- | (cc=0.4577) | info on Rv0940c/- |
Rv1511/gmdA | (cc=0.4575) | info on Rv1511/gmdA |
Correlation of Rv2954c/- with Rv2429/ahpD
Normalized LFCs for Rv2954c/-:
(description and provenance of datasets)
Rv2954c/- | Rv2429/ahpD | |
Fe_supp_jason_reseq | 0.18 | 0.174 |
low_pH_jason_reseq | -1.161 | -0.867 |
NO_jason_reseq | -0.412 | 0.0 |
B6_jason_reseq | -0.145 | 0.363 |
MHCII_jason_reseq | -0.033 | 1.557 |
Isoniazid02 | -0.723 | -4.061 |
Rifampicin4 | 0.241 | 0.171 |
Ethambutol3 | -0.405 | 0.32 |
Meropenem3 | -0.68 | -0.819 |
Vancomycin16 | -0.17 | 0.167 |
Rv2680_day32 | 0.205 | -0.016 |
H37Rv_KO_MarP | -0.069 | 0.567 |
hypoxia_3wks | -0.104 | 0.311 |
hypoxia_6wks | 0.052 | 0.464 |
glycerol | 0.439 | 0.178 |
cholesterol | -0.029 | 0.015 |
AJ | -0.123 | 0.513 |
Bibs02 | -0.449 | 0.212 |
Bibs02c | -0.631 | 1.36 |
BL6 | 0.216 | 0.58 |
BL6a | 0.263 | 1.118 |
BXD01 | 0.268 | 0.56 |
BXD010 | 0.447 | -0.448 |
BXD011 | 0.468 | -0.123 |
BXD03 | 0.66 | 0.107 |
BXD04 | 0.546 | 0.418 |
BXD05 | 0.644 | 0.719 |
BXD06 | 0.056 | 0.053 |
BXD07 | 0.194 | 0.822 |
BXD08 | -0.063 | 0.04 |
BXD09 | 0.494 | -0.044 |
CAST | -0.053 | -0.072 |
CCcont | 0.171 | 0.816 |
DS01 | -0.062 | 0.0 |
DS02 | -0.169 | 0.534 |
DS04 | 0.222 | -0.37 |
DS0c | 0.368 | 0.718 |
GP01 | 1.056 | 0.509 |
GP02 | -0.374 | -1.258 |
GP0c | -0.138 | -1.082 |
NOD | 0.812 | 0.57 |
NZO | 0.012 | -0.481 |
PWK | 0.347 | 0.155 |
H37Rv_KO_CtpC | -0.465 | -0.592 |
H37Rv_KO_CtpD | 0.501 | 0.751 |
H37Rv_KO_Rv1272 | 1.286 | 0.029 |
H37Rv_KO_SugABC | 0.428 | 0.283 |
H37Rv_KO_MbtN | 0.066 | 0.401 |
Trans05 | 0.423 | 1.134 |
macrophage_unactivated | -0.076 | 0.294 |
IL1 | -0.641 | -1.006 |
Rapamycin | 0.055 | 0.083 |
Tcell | -0.394 | -0.228 |
GMCSF | -0.05 | 1.014 |
IFNab | -0.357 | -0.085 |
IFNg | 0.206 | 0.732 |
IFNg_GMCSF1 | 1.178 | 0.17 |
Rv1432_day32 | 0.631 | 0.9 |
Rv1565c_day32 | 0.605 | 0.147 |
secA2_input | -0.775 | -2.016 |
delta_Rv3594 | 0.083 | 1.462 |
delta_Rv3717 | -0.186 | 0.132 |
delta_Rv3811 | 0.311 | 1.077 |
delta_Rv0954 | 0.075 | 1.145 |
PonA1 | 0.5 | 0.709 |
EccD1_KO | 0.234 | -0.756 |
EspI_KO | 0.482 | 0.171 |
PE35_KO | 0.846 | 0.502 |
PPE68_KO | 0.419 | 0.963 |
glycerol2 | 1.092 | 0.943 |
lignocerate | 0.822 | 0.839 |
oleate | 1.143 | 0.818 |
phosphatidylcholine | 1.049 | 0.796 |
acetate | 0.007 | 0.519 |
glucAc | -0.026 | 0.423 |
Rv0950ko | 0.223 | -0.853 |
Rv1096ko | -0.63 | -1.668 |
Rv3684ko | -0.082 | -1.723 |
delta_otsA_trehalose | 0.216 | 1.015 |