Top 10 genes with highest correlation to Rv2954c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2345/- | (cc=0.5093) | info on Rv2345/- |
| Rv3323c/moaX | (cc=0.5085) | info on Rv3323c/moaX |
| Rv1981c/nrdF1 | (cc=0.5056) | info on Rv1981c/nrdF1 |
| Rv3164c/moxR3 | (cc=0.5047) | info on Rv3164c/moxR3 |
| Rv2675c/- | (cc=0.5015) | info on Rv2675c/- |
| Rv1175c/fadH | (cc=0.4701) | info on Rv1175c/fadH |
| Rv2429/ahpD | (cc=0.4693) | info on Rv2429/ahpD |
| Rv2602/vapC41 | (cc=0.4588) | info on Rv2602/vapC41 |
| Rv0940c/- | (cc=0.4577) | info on Rv0940c/- |
| Rv1511/gmdA | (cc=0.4575) | info on Rv1511/gmdA |
Correlation of Rv2954c/- with Rv1175c/fadH
Normalized LFCs for Rv2954c/-:
(description and provenance of datasets)
| Rv2954c/- | Rv1175c/fadH | |
| Fe_supp_jason_reseq | 0.18 | -0.78 |
| low_pH_jason_reseq | -1.161 | -0.489 |
| NO_jason_reseq | -0.412 | -0.452 |
| B6_jason_reseq | -0.145 | -0.548 |
| MHCII_jason_reseq | -0.033 | -0.009 |
| Isoniazid02 | -0.723 | -0.784 |
| Rifampicin4 | 0.241 | 0.401 |
| Ethambutol3 | -0.405 | -0.703 |
| Meropenem3 | -0.68 | -1.731 |
| Vancomycin16 | -0.17 | -0.629 |
| Rv2680_day32 | 0.205 | -0.947 |
| H37Rv_KO_MarP | -0.069 | 0.13 |
| hypoxia_3wks | -0.104 | 0.658 |
| hypoxia_6wks | 0.052 | -0.088 |
| glycerol | 0.439 | 0.015 |
| cholesterol | -0.029 | 0.273 |
| AJ | -0.123 | -0.279 |
| Bibs02 | -0.449 | -0.191 |
| Bibs02c | -0.631 | -0.155 |
| BL6 | 0.216 | 0.0 |
| BL6a | 0.263 | -0.043 |
| BXD01 | 0.268 | -0.445 |
| BXD010 | 0.447 | -0.046 |
| BXD011 | 0.468 | 0.178 |
| BXD03 | 0.66 | 0.111 |
| BXD04 | 0.546 | 0.0 |
| BXD05 | 0.644 | 0.488 |
| BXD06 | 0.056 | -0.307 |
| BXD07 | 0.194 | -0.246 |
| BXD08 | -0.063 | -0.429 |
| BXD09 | 0.494 | 0.257 |
| CAST | -0.053 | 0.174 |
| CCcont | 0.171 | -0.121 |
| DS01 | -0.062 | -0.342 |
| DS02 | -0.169 | -0.128 |
| DS04 | 0.222 | -0.429 |
| DS0c | 0.368 | -0.176 |
| GP01 | 1.056 | 0.125 |
| GP02 | -0.374 | -0.992 |
| GP0c | -0.138 | -0.76 |
| NOD | 0.812 | -0.148 |
| NZO | 0.012 | -0.803 |
| PWK | 0.347 | -0.503 |
| H37Rv_KO_CtpC | -0.465 | -0.071 |
| H37Rv_KO_CtpD | 0.501 | 1.533 |
| H37Rv_KO_Rv1272 | 1.286 | 0.161 |
| H37Rv_KO_SugABC | 0.428 | 0.1 |
| H37Rv_KO_MbtN | 0.066 | -0.108 |
| Trans05 | 0.423 | 0.474 |
| macrophage_unactivated | -0.076 | 0.379 |
| IL1 | -0.641 | -0.163 |
| Rapamycin | 0.055 | 0.239 |
| Tcell | -0.394 | 0.391 |
| GMCSF | -0.05 | 0.488 |
| IFNab | -0.357 | -0.166 |
| IFNg | 0.206 | 0.142 |
| IFNg_GMCSF1 | 1.178 | 0.245 |
| Rv1432_day32 | 0.631 | -0.017 |
| Rv1565c_day32 | 0.605 | -0.011 |
| secA2_input | -0.775 | 0.214 |
| delta_Rv3594 | 0.083 | -0.041 |
| delta_Rv3717 | -0.186 | -0.214 |
| delta_Rv3811 | 0.311 | -0.297 |
| delta_Rv0954 | 0.075 | 0.287 |
| PonA1 | 0.5 | -0.031 |
| EccD1_KO | 0.234 | 0.793 |
| EspI_KO | 0.482 | 0.0 |
| PE35_KO | 0.846 | 0.79 |
| PPE68_KO | 0.419 | 0.294 |
| glycerol2 | 1.092 | 0.615 |
| lignocerate | 0.822 | 0.789 |
| oleate | 1.143 | 0.077 |
| phosphatidylcholine | 1.049 | 0.727 |
| acetate | 0.007 | 0.068 |
| glucAc | -0.026 | 0.124 |
| Rv0950ko | 0.223 | -0.057 |
| Rv1096ko | -0.63 | -0.329 |
| Rv3684ko | -0.082 | -0.095 |
| delta_otsA_trehalose | 0.216 | 0.42 |