Top 10 genes with highest correlation to Rv2905/lppW:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2633c/- | (cc=0.4788) | info on Rv2633c/- |
| Rv1956/higA | (cc=0.4613) | info on Rv1956/higA |
| Rv3357/relJ | (cc=0.4385) | info on Rv3357/relJ |
| Rv1151c/- | (cc=0.4382) | info on Rv1151c/- |
| Rv1694/tlyA | (cc=0.4329) | info on Rv1694/tlyA |
| Rv2713/sthA | (cc=0.4293) | info on Rv2713/sthA |
| Rv2057c/rpmG1 | (cc=0.413) | info on Rv2057c/rpmG1 |
| Rv2027c/dosT | (cc=0.4104) | info on Rv2027c/dosT |
| Rv1139c/- | (cc=0.4099) | info on Rv1139c/- |
| Rv0871/cspB | (cc=0.407) | info on Rv0871/cspB |
Correlation of Rv2905/lppW with Rv2633c/-
Normalized LFCs for Rv2905/lppW:
(description and provenance of datasets)
| Rv2905/lppW | Rv2633c/- | |
| Fe_supp_jason_reseq | -0.409 | -0.311 |
| low_pH_jason_reseq | -0.303 | -1.37 |
| NO_jason_reseq | 1.906 | 1.982 |
| B6_jason_reseq | 1.243 | 2.097 |
| MHCII_jason_reseq | 0.125 | 2.688 |
| Isoniazid02 | -0.279 | -1.835 |
| Rifampicin4 | 1.803 | 0.788 |
| Ethambutol3 | -0.792 | -1.015 |
| Meropenem3 | 1.132 | 1.543 |
| Vancomycin16 | 0.223 | 0.992 |
| Rv2680_day32 | 0.18 | -1.492 |
| H37Rv_KO_MarP | 0.608 | -0.251 |
| hypoxia_3wks | -1.144 | -1.635 |
| hypoxia_6wks | -0.217 | -0.935 |
| glycerol | -1.22 | -3.439 |
| cholesterol | 0.347 | -1.698 |
| AJ | 0.108 | -1.847 |
| Bibs02 | -0.921 | -2.015 |
| Bibs02c | -0.685 | -1.479 |
| BL6 | 0.288 | -4.097 |
| BL6a | -0.524 | -2.705 |
| BXD01 | 0.701 | -3.305 |
| BXD010 | 1.167 | -2.545 |
| BXD011 | -0.262 | -3.454 |
| BXD03 | -0.338 | -4.022 |
| BXD04 | 0.964 | -3.05 |
| BXD05 | -0.257 | -3.466 |
| BXD06 | 0.054 | -3.175 |
| BXD07 | 0.547 | -3.925 |
| BXD08 | 0.693 | -3.425 |
| BXD09 | -0.025 | -3.938 |
| CAST | 0.158 | -1.121 |
| CCcont | -0.603 | -3.226 |
| DS01 | -0.708 | -2.479 |
| DS02 | -0.44 | -2.478 |
| DS04 | -0.774 | -1.739 |
| DS0c | -0.875 | -3.309 |
| GP01 | -0.203 | -2.635 |
| GP02 | 1.252 | -2.268 |
| GP0c | -0.479 | -3.348 |
| NOD | -0.172 | -0.823 |
| NZO | 0.754 | -1.331 |
| PWK | 0.524 | -1.07 |
| H37Rv_KO_CtpC | -0.866 | -4.742 |
| H37Rv_KO_CtpD | 0.175 | -1.586 |
| H37Rv_KO_Rv1272 | 0.074 | -3.011 |
| H37Rv_KO_SugABC | -0.813 | -1.628 |
| H37Rv_KO_MbtN | 1.121 | -2.419 |
| Trans05 | 0.108 | -2.951 |
| macrophage_unactivated | -0.376 | -5.293 |
| IL1 | -0.979 | -4.974 |
| Rapamycin | -0.571 | -5.146 |
| Tcell | -0.088 | -4.558 |
| GMCSF | -1.199 | -4.605 |
| IFNab | -1.427 | -6.0 |
| IFNg | -0.278 | -4.145 |
| IFNg_GMCSF1 | -0.465 | -4.452 |
| Rv1432_day32 | 1.027 | -1.082 |
| Rv1565c_day32 | 0.0 | -0.234 |
| secA2_input | 0.069 | -0.355 |
| delta_Rv3594 | 0.197 | 0.136 |
| delta_Rv3717 | -0.117 | -1.179 |
| delta_Rv3811 | 0.183 | -0.013 |
| delta_Rv0954 | 0.549 | 0.286 |
| PonA1 | -0.778 | 0.524 |
| EccD1_KO | 0.796 | -0.987 |
| EspI_KO | -0.023 | -0.337 |
| PE35_KO | -0.452 | 0.435 |
| PPE68_KO | 0.266 | 0.701 |
| glycerol2 | 1.396 | 2.304 |
| lignocerate | 0.285 | 2.288 |
| oleate | 1.74 | 1.324 |
| phosphatidylcholine | 0.437 | 6.0 |
| acetate | 0.63 | 1.057 |
| glucAc | 0.526 | 0.245 |
| Rv0950ko | -0.552 | -1.291 |
| Rv1096ko | 0.196 | -1.846 |
| Rv3684ko | -0.065 | -0.55 |
| delta_otsA_trehalose | -0.602 | -0.497 |