Top 10 genes with highest correlation to Rv2902c/rnhB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.5761) | info on Rv0228/- |
| Rv1736c/narX | (cc=0.5739) | info on Rv1736c/narX |
| Rv0325/- | (cc=0.5733) | info on Rv0325/- |
| Rv0536/galE3 | (cc=0.5691) | info on Rv0536/galE3 |
| Rv2727c/miaA | (cc=0.5587) | info on Rv2727c/miaA |
| Rv3737/- | (cc=0.5507) | info on Rv3737/- |
| Rv2687c/- | (cc=0.5442) | info on Rv2687c/- |
| Rv0687/- | (cc=0.5391) | info on Rv0687/- |
| Rv1956/higA | (cc=0.5235) | info on Rv1956/higA |
| Rv3395c/- | (cc=0.5196) | info on Rv3395c/- |
Correlation of Rv2902c/rnhB with Rv3395c/-
Normalized LFCs for Rv2902c/rnhB:
(description and provenance of datasets)
| Rv2902c/rnhB | Rv3395c/- | |
| Fe_supp_jason_reseq | 0.393 | 0.38 |
| low_pH_jason_reseq | 0.806 | 0.142 |
| NO_jason_reseq | 1.239 | 1.496 |
| B6_jason_reseq | 1.308 | 2.279 |
| MHCII_jason_reseq | -0.026 | 2.468 |
| Isoniazid02 | 1.075 | 2.949 |
| Rifampicin4 | 0.769 | 1.776 |
| Ethambutol3 | 0.97 | 2.824 |
| Meropenem3 | 1.962 | 0.666 |
| Vancomycin16 | 0.47 | 0.83 |
| Rv2680_day32 | 0.93 | -0.131 |
| H37Rv_KO_MarP | -0.796 | 0.207 |
| hypoxia_3wks | 0.351 | -1.463 |
| hypoxia_6wks | 0.539 | -1.685 |
| glycerol | 0.301 | 1.328 |
| cholesterol | 0.068 | -0.104 |
| AJ | 0.553 | 0.723 |
| Bibs02 | 0.38 | -1.807 |
| Bibs02c | 0.109 | -0.13 |
| BL6 | -0.3 | -1.264 |
| BL6a | -0.436 | -0.217 |
| BXD01 | -1.098 | -1.377 |
| BXD010 | -0.29 | -1.699 |
| BXD011 | -0.358 | -1.44 |
| BXD03 | 0.071 | -2.616 |
| BXD04 | -1.043 | -1.368 |
| BXD05 | -0.369 | -1.745 |
| BXD06 | -0.12 | -2.2 |
| BXD07 | -0.679 | -3.021 |
| BXD08 | -0.365 | 1.085 |
| BXD09 | -0.738 | -2.15 |
| CAST | 0.269 | 0.02 |
| CCcont | -1.027 | -0.876 |
| DS01 | 0.263 | -0.303 |
| DS02 | 0.911 | 0.214 |
| DS04 | 0.131 | 0.0 |
| DS0c | 0.652 | 0.231 |
| GP01 | -1.102 | -1.669 |
| GP02 | 1.067 | -1.61 |
| GP0c | -0.26 | -0.931 |
| NOD | -0.228 | -0.971 |
| NZO | -0.829 | -0.218 |
| PWK | 0.303 | 0.871 |
| H37Rv_KO_CtpC | -1.133 | -3.435 |
| H37Rv_KO_CtpD | -0.304 | -2.598 |
| H37Rv_KO_Rv1272 | -0.778 | 1.022 |
| H37Rv_KO_SugABC | -1.451 | -1.973 |
| H37Rv_KO_MbtN | -0.42 | -1.836 |
| Trans05 | -0.377 | -0.045 |
| macrophage_unactivated | -0.556 | -3.857 |
| IL1 | -0.925 | -4.405 |
| Rapamycin | -0.801 | -3.069 |
| Tcell | 0.166 | -2.255 |
| GMCSF | -0.111 | -2.64 |
| IFNab | -0.983 | -0.553 |
| IFNg | -0.834 | -1.849 |
| IFNg_GMCSF1 | 0.223 | -1.524 |
| Rv1432_day32 | -0.175 | -0.142 |
| Rv1565c_day32 | 0.483 | -2.088 |
| secA2_input | 0.02 | 1.108 |
| delta_Rv3594 | 0.675 | 2.877 |
| delta_Rv3717 | 0.566 | 3.361 |
| delta_Rv3811 | 0.766 | 1.988 |
| delta_Rv0954 | 0.767 | 2.113 |
| PonA1 | 0.497 | 2.765 |
| EccD1_KO | -0.296 | -0.296 |
| EspI_KO | -0.713 | -1.335 |
| PE35_KO | -0.438 | -1.508 |
| PPE68_KO | -0.518 | -1.129 |
| glycerol2 | 0.185 | 3.254 |
| lignocerate | 0.0 | 3.841 |
| oleate | 0.859 | 0.0 |
| phosphatidylcholine | 0.536 | 3.408 |
| acetate | 0.161 | 5.243 |
| glucAc | 0.335 | 3.947 |
| Rv0950ko | -0.069 | -0.344 |
| Rv1096ko | -0.642 | 0.268 |
| Rv3684ko | 0.223 | 0.4 |
| delta_otsA_trehalose | 0.493 | -0.408 |