Top 10 genes with highest correlation to Rv2902c/rnhB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.5761) | info on Rv0228/- |
| Rv1736c/narX | (cc=0.5739) | info on Rv1736c/narX |
| Rv0325/- | (cc=0.5733) | info on Rv0325/- |
| Rv0536/galE3 | (cc=0.5691) | info on Rv0536/galE3 |
| Rv2727c/miaA | (cc=0.5587) | info on Rv2727c/miaA |
| Rv3737/- | (cc=0.5507) | info on Rv3737/- |
| Rv2687c/- | (cc=0.5442) | info on Rv2687c/- |
| Rv0687/- | (cc=0.5391) | info on Rv0687/- |
| Rv1956/higA | (cc=0.5235) | info on Rv1956/higA |
| Rv3395c/- | (cc=0.5196) | info on Rv3395c/- |
Correlation of Rv2902c/rnhB with Rv0687/-
Normalized LFCs for Rv2902c/rnhB:
(description and provenance of datasets)
| Rv2902c/rnhB | Rv0687/- | |
| Fe_supp_jason_reseq | 0.393 | -1.187 |
| low_pH_jason_reseq | 0.806 | 0.805 |
| NO_jason_reseq | 1.239 | 0.412 |
| B6_jason_reseq | 1.308 | -0.312 |
| MHCII_jason_reseq | -0.026 | -0.311 |
| Isoniazid02 | 1.075 | 1.116 |
| Rifampicin4 | 0.769 | 1.083 |
| Ethambutol3 | 0.97 | 1.198 |
| Meropenem3 | 1.962 | 3.163 |
| Vancomycin16 | 0.47 | 1.061 |
| Rv2680_day32 | 0.93 | -0.637 |
| H37Rv_KO_MarP | -0.796 | -0.189 |
| hypoxia_3wks | 0.351 | -0.311 |
| hypoxia_6wks | 0.539 | 0.867 |
| glycerol | 0.301 | -0.764 |
| cholesterol | 0.068 | -0.391 |
| AJ | 0.553 | 0.316 |
| Bibs02 | 0.38 | -0.624 |
| Bibs02c | 0.109 | -1.381 |
| BL6 | -0.3 | -0.89 |
| BL6a | -0.436 | -1.075 |
| BXD01 | -1.098 | -0.518 |
| BXD010 | -0.29 | -1.907 |
| BXD011 | -0.358 | -1.009 |
| BXD03 | 0.071 | -1.15 |
| BXD04 | -1.043 | -1.209 |
| BXD05 | -0.369 | -1.271 |
| BXD06 | -0.12 | -1.261 |
| BXD07 | -0.679 | -0.847 |
| BXD08 | -0.365 | -0.091 |
| BXD09 | -0.738 | -1.374 |
| CAST | 0.269 | 0.177 |
| CCcont | -1.027 | -0.403 |
| DS01 | 0.263 | -0.298 |
| DS02 | 0.911 | -0.443 |
| DS04 | 0.131 | 0.538 |
| DS0c | 0.652 | 0.167 |
| GP01 | -1.102 | 0.0 |
| GP02 | 1.067 | -1.195 |
| GP0c | -0.26 | 0.677 |
| NOD | -0.228 | -1.219 |
| NZO | -0.829 | 0.201 |
| PWK | 0.303 | -0.026 |
| H37Rv_KO_CtpC | -1.133 | 0.164 |
| H37Rv_KO_CtpD | -0.304 | 0.942 |
| H37Rv_KO_Rv1272 | -0.778 | -0.221 |
| H37Rv_KO_SugABC | -1.451 | -0.583 |
| H37Rv_KO_MbtN | -0.42 | 0.164 |
| Trans05 | -0.377 | 0.513 |
| macrophage_unactivated | -0.556 | -1.61 |
| IL1 | -0.925 | -1.385 |
| Rapamycin | -0.801 | -1.841 |
| Tcell | 0.166 | -1.522 |
| GMCSF | -0.111 | -0.082 |
| IFNab | -0.983 | -1.542 |
| IFNg | -0.834 | -1.136 |
| IFNg_GMCSF1 | 0.223 | 0.371 |
| Rv1432_day32 | -0.175 | -0.661 |
| Rv1565c_day32 | 0.483 | 1.469 |
| secA2_input | 0.02 | 0.967 |
| delta_Rv3594 | 0.675 | 1.744 |
| delta_Rv3717 | 0.566 | 1.085 |
| delta_Rv3811 | 0.766 | 1.558 |
| delta_Rv0954 | 0.767 | 0.238 |
| PonA1 | 0.497 | 0.974 |
| EccD1_KO | -0.296 | -0.187 |
| EspI_KO | -0.713 | -0.625 |
| PE35_KO | -0.438 | -0.455 |
| PPE68_KO | -0.518 | -0.499 |
| glycerol2 | 0.185 | 0.635 |
| lignocerate | 0.0 | 0.061 |
| oleate | 0.859 | 0.912 |
| phosphatidylcholine | 0.536 | 0.326 |
| acetate | 0.161 | -0.266 |
| glucAc | 0.335 | 0.026 |
| Rv0950ko | -0.069 | -0.241 |
| Rv1096ko | -0.642 | -0.564 |
| Rv3684ko | 0.223 | -1.15 |
| delta_otsA_trehalose | 0.493 | 0.333 |