Top 10 genes with highest correlation to Rv2902c/rnhB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.5761) | info on Rv0228/- |
| Rv1736c/narX | (cc=0.5739) | info on Rv1736c/narX |
| Rv0325/- | (cc=0.5733) | info on Rv0325/- |
| Rv0536/galE3 | (cc=0.5691) | info on Rv0536/galE3 |
| Rv2727c/miaA | (cc=0.5587) | info on Rv2727c/miaA |
| Rv3737/- | (cc=0.5507) | info on Rv3737/- |
| Rv2687c/- | (cc=0.5442) | info on Rv2687c/- |
| Rv0687/- | (cc=0.5391) | info on Rv0687/- |
| Rv1956/higA | (cc=0.5235) | info on Rv1956/higA |
| Rv3395c/- | (cc=0.5196) | info on Rv3395c/- |
Correlation of Rv2902c/rnhB with Rv0228/-
Normalized LFCs for Rv2902c/rnhB:
(description and provenance of datasets)
| Rv2902c/rnhB | Rv0228/- | |
| Fe_supp_jason_reseq | 0.393 | 1.07 |
| low_pH_jason_reseq | 0.806 | 0.0 |
| NO_jason_reseq | 1.239 | 0.0 |
| B6_jason_reseq | 1.308 | 1.759 |
| MHCII_jason_reseq | -0.026 | 0.37 |
| Isoniazid02 | 1.075 | -0.167 |
| Rifampicin4 | 0.769 | 0.558 |
| Ethambutol3 | 0.97 | -0.14 |
| Meropenem3 | 1.962 | 0.128 |
| Vancomycin16 | 0.47 | 0.796 |
| Rv2680_day32 | 0.93 | 0.0 |
| H37Rv_KO_MarP | -0.796 | -0.684 |
| hypoxia_3wks | 0.351 | 0.678 |
| hypoxia_6wks | 0.539 | -0.626 |
| glycerol | 0.301 | 0.585 |
| cholesterol | 0.068 | 0.915 |
| AJ | 0.553 | 0.05 |
| Bibs02 | 0.38 | 0.56 |
| Bibs02c | 0.109 | -1.66 |
| BL6 | -0.3 | -2.023 |
| BL6a | -0.436 | -2.66 |
| BXD01 | -1.098 | -2.107 |
| BXD010 | -0.29 | -2.072 |
| BXD011 | -0.358 | -2.06 |
| BXD03 | 0.071 | -2.187 |
| BXD04 | -1.043 | -2.0 |
| BXD05 | -0.369 | -2.177 |
| BXD06 | -0.12 | -2.159 |
| BXD07 | -0.679 | -2.24 |
| BXD08 | -0.365 | -2.151 |
| BXD09 | -0.738 | -2.273 |
| CAST | 0.269 | -0.389 |
| CCcont | -1.027 | -2.131 |
| DS01 | 0.263 | -0.727 |
| DS02 | 0.911 | -1.942 |
| DS04 | 0.131 | 0.779 |
| DS0c | 0.652 | -1.431 |
| GP01 | -1.102 | -1.597 |
| GP02 | 1.067 | -1.346 |
| GP0c | -0.26 | -2.103 |
| NOD | -0.228 | -0.83 |
| NZO | -0.829 | -0.285 |
| PWK | 0.303 | 0.168 |
| H37Rv_KO_CtpC | -1.133 | -2.628 |
| H37Rv_KO_CtpD | -0.304 | -1.922 |
| H37Rv_KO_Rv1272 | -0.778 | -2.281 |
| H37Rv_KO_SugABC | -1.451 | -1.503 |
| H37Rv_KO_MbtN | -0.42 | -1.667 |
| Trans05 | -0.377 | -1.983 |
| macrophage_unactivated | -0.556 | -2.923 |
| IL1 | -0.925 | -2.747 |
| Rapamycin | -0.801 | -2.842 |
| Tcell | 0.166 | -3.017 |
| GMCSF | -0.111 | -2.445 |
| IFNab | -0.983 | -2.799 |
| IFNg | -0.834 | -2.475 |
| IFNg_GMCSF1 | 0.223 | -1.386 |
| Rv1432_day32 | -0.175 | 0.0 |
| Rv1565c_day32 | 0.483 | 0.0 |
| secA2_input | 0.02 | 1.565 |
| delta_Rv3594 | 0.675 | 0.402 |
| delta_Rv3717 | 0.566 | 0.0 |
| delta_Rv3811 | 0.766 | 0.205 |
| delta_Rv0954 | 0.767 | 0.0 |
| PonA1 | 0.497 | 0.0 |
| EccD1_KO | -0.296 | -0.865 |
| EspI_KO | -0.713 | -0.359 |
| PE35_KO | -0.438 | -0.368 |
| PPE68_KO | -0.518 | -0.841 |
| glycerol2 | 0.185 | 0.0 |
| lignocerate | 0.0 | 0.591 |
| oleate | 0.859 | 0.0 |
| phosphatidylcholine | 0.536 | 0.193 |
| acetate | 0.161 | 0.0 |
| glucAc | 0.335 | 0.0 |
| Rv0950ko | -0.069 | 0.793 |
| Rv1096ko | -0.642 | 1.143 |
| Rv3684ko | 0.223 | 0.452 |
| delta_otsA_trehalose | 0.493 | 0.0 |