Top 10 genes with highest correlation to Rv2898c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3411c/guaB2 | (cc=0.4892) | info on Rv3411c/guaB2 |
| Rv3696c/glpK | (cc=0.4577) | info on Rv3696c/glpK |
| Rv2750/- | (cc=0.4429) | info on Rv2750/- |
| Rv2655c/- | (cc=0.4409) | info on Rv2655c/- |
| Rv0526/- | (cc=0.4319) | info on Rv0526/- |
| Rv2169c/- | (cc=0.4306) | info on Rv2169c/- |
| Rv3475/- | (cc=0.4303) | info on Rv3475/- |
| Rv2615c/PE_PGRS45 | (cc=0.4185) | info on Rv2615c/PE_PGRS45 |
| Rv2489c/- | (cc=0.4122) | info on Rv2489c/- |
| Rv3187/- | (cc=0.412) | info on Rv3187/- |
Correlation of Rv2898c/- with Rv3696c/glpK
Normalized LFCs for Rv2898c/-:
(description and provenance of datasets)
| Rv2898c/- | Rv3696c/glpK | |
| Fe_supp_jason_reseq | -1.514 | 1.778 |
| low_pH_jason_reseq | -1.066 | 6.0 |
| NO_jason_reseq | -0.522 | 6.0 |
| B6_jason_reseq | -1.384 | 6.0 |
| MHCII_jason_reseq | 0.282 | 1.383 |
| Isoniazid02 | -0.455 | -1.455 |
| Rifampicin4 | -1.668 | -1.995 |
| Ethambutol3 | -1.216 | 1.233 |
| Meropenem3 | -1.744 | -0.771 |
| Vancomycin16 | -1.122 | -1.366 |
| Rv2680_day32 | -0.947 | 2.647 |
| H37Rv_KO_MarP | 0.635 | 0.244 |
| hypoxia_3wks | 1.316 | 1.75 |
| hypoxia_6wks | 1.957 | 6.0 |
| glycerol | 0.929 | -5.227 |
| cholesterol | -0.582 | -0.639 |
| AJ | 3.511 | 4.528 |
| Bibs02 | 1.71 | -0.332 |
| Bibs02c | -2.099 | 0.089 |
| BL6 | -2.023 | -1.033 |
| BL6a | -0.93 | 0.664 |
| BXD01 | -1.384 | 1.68 |
| BXD010 | 1.412 | 1.312 |
| BXD011 | 0.325 | 2.299 |
| BXD03 | -0.5 | -0.426 |
| BXD04 | -0.457 | 0.835 |
| BXD05 | -0.061 | 0.526 |
| BXD06 | 0.058 | 2.16 |
| BXD07 | -1.237 | 1.097 |
| BXD08 | 0.649 | 0.628 |
| BXD09 | -0.274 | 1.682 |
| CAST | 0.627 | 5.014 |
| CCcont | -2.416 | -1.866 |
| DS01 | 0.152 | 0.161 |
| DS02 | -1.624 | 0.402 |
| DS04 | 3.064 | 1.456 |
| DS0c | 0.047 | -2.154 |
| GP01 | -1.498 | -2.071 |
| GP02 | -1.346 | -1.551 |
| GP0c | -1.031 | -2.908 |
| NOD | 0.573 | 2.301 |
| NZO | 3.55 | 4.859 |
| PWK | 6.0 | 6.0 |
| H37Rv_KO_CtpC | -0.879 | 0.534 |
| H37Rv_KO_CtpD | -1.701 | 2.55 |
| H37Rv_KO_Rv1272 | -0.032 | -1.936 |
| H37Rv_KO_SugABC | -0.885 | -0.424 |
| H37Rv_KO_MbtN | -1.471 | -0.166 |
| Trans05 | -1.654 | -0.63 |
| macrophage_unactivated | -1.566 | -1.607 |
| IL1 | -0.765 | -1.041 |
| Rapamycin | -0.697 | -1.234 |
| Tcell | 0.857 | 0.596 |
| GMCSF | -1.946 | -2.54 |
| IFNab | -0.877 | -1.061 |
| IFNg | -1.326 | -0.81 |
| IFNg_GMCSF1 | -1.559 | 1.273 |
| Rv1432_day32 | 0.0 | 0.343 |
| Rv1565c_day32 | -1.829 | -0.924 |
| secA2_input | 1.263 | -0.945 |
| delta_Rv3594 | -1.046 | -2.6 |
| delta_Rv3717 | 0.313 | -1.286 |
| delta_Rv3811 | -0.351 | -2.051 |
| delta_Rv0954 | -0.827 | -1.101 |
| PonA1 | -0.511 | 1.358 |
| EccD1_KO | -1.73 | 0.0 |
| EspI_KO | 2.236 | -0.265 |
| PE35_KO | 2.08 | 1.339 |
| PPE68_KO | 2.281 | 0.793 |
| glycerol2 | -2.996 | -2.844 |
| lignocerate | -1.891 | -1.967 |
| oleate | -3.031 | -2.165 |
| phosphatidylcholine | -2.801 | -2.139 |
| acetate | -3.554 | -1.519 |
| glucAc | -2.21 | -1.194 |
| Rv0950ko | -0.407 | -0.874 |
| Rv1096ko | -0.407 | -0.875 |
| Rv3684ko | -2.358 | -0.609 |
| delta_otsA_trehalose | 2.546 | -0.103 |