Top 10 genes with highest correlation to Rv2898c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3411c/guaB2 | (cc=0.4892) | info on Rv3411c/guaB2 |
| Rv3696c/glpK | (cc=0.4577) | info on Rv3696c/glpK |
| Rv2750/- | (cc=0.4429) | info on Rv2750/- |
| Rv2655c/- | (cc=0.4409) | info on Rv2655c/- |
| Rv0526/- | (cc=0.4319) | info on Rv0526/- |
| Rv2169c/- | (cc=0.4306) | info on Rv2169c/- |
| Rv3475/- | (cc=0.4303) | info on Rv3475/- |
| Rv2615c/PE_PGRS45 | (cc=0.4185) | info on Rv2615c/PE_PGRS45 |
| Rv2489c/- | (cc=0.4122) | info on Rv2489c/- |
| Rv3187/- | (cc=0.412) | info on Rv3187/- |
Correlation of Rv2898c/- with Rv3187/-
Normalized LFCs for Rv2898c/-:
(description and provenance of datasets)
| Rv2898c/- | Rv3187/- | |
| Fe_supp_jason_reseq | -1.514 | -0.646 |
| low_pH_jason_reseq | -1.066 | -0.571 |
| NO_jason_reseq | -0.522 | 0.165 |
| B6_jason_reseq | -1.384 | -0.598 |
| MHCII_jason_reseq | 0.282 | -0.095 |
| Isoniazid02 | -0.455 | -0.122 |
| Rifampicin4 | -1.668 | 0.59 |
| Ethambutol3 | -1.216 | 0.37 |
| Meropenem3 | -1.744 | -0.48 |
| Vancomycin16 | -1.122 | -0.318 |
| Rv2680_day32 | -0.947 | 0.127 |
| H37Rv_KO_MarP | 0.635 | -0.147 |
| hypoxia_3wks | 1.316 | 0.494 |
| hypoxia_6wks | 1.957 | 0.031 |
| glycerol | 0.929 | -0.772 |
| cholesterol | -0.582 | 0.125 |
| AJ | 3.511 | 1.301 |
| Bibs02 | 1.71 | 1.102 |
| Bibs02c | -2.099 | 1.544 |
| BL6 | -2.023 | 0.171 |
| BL6a | -0.93 | 0.954 |
| BXD01 | -1.384 | 0.523 |
| BXD010 | 1.412 | 0.722 |
| BXD011 | 0.325 | 0.739 |
| BXD03 | -0.5 | 0.722 |
| BXD04 | -0.457 | 0.458 |
| BXD05 | -0.061 | 0.933 |
| BXD06 | 0.058 | 0.424 |
| BXD07 | -1.237 | 0.835 |
| BXD08 | 0.649 | 0.411 |
| BXD09 | -0.274 | 0.642 |
| CAST | 0.627 | 1.078 |
| CCcont | -2.416 | -0.034 |
| DS01 | 0.152 | 0.739 |
| DS02 | -1.624 | 0.788 |
| DS04 | 3.064 | 1.003 |
| DS0c | 0.047 | 0.919 |
| GP01 | -1.498 | 1.172 |
| GP02 | -1.346 | 1.381 |
| GP0c | -1.031 | 0.613 |
| NOD | 0.573 | 1.222 |
| NZO | 3.55 | 1.017 |
| PWK | 6.0 | 1.206 |
| H37Rv_KO_CtpC | -0.879 | 0.725 |
| H37Rv_KO_CtpD | -1.701 | 0.739 |
| H37Rv_KO_Rv1272 | -0.032 | 0.516 |
| H37Rv_KO_SugABC | -0.885 | 0.718 |
| H37Rv_KO_MbtN | -1.471 | 0.54 |
| Trans05 | -1.654 | 0.823 |
| macrophage_unactivated | -1.566 | -0.609 |
| IL1 | -0.765 | -0.38 |
| Rapamycin | -0.697 | -0.371 |
| Tcell | 0.857 | -0.951 |
| GMCSF | -1.946 | -0.069 |
| IFNab | -0.877 | -0.883 |
| IFNg | -1.326 | -0.211 |
| IFNg_GMCSF1 | -1.559 | -0.104 |
| Rv1432_day32 | 0.0 | 0.443 |
| Rv1565c_day32 | -1.829 | 0.073 |
| secA2_input | 1.263 | 0.202 |
| delta_Rv3594 | -1.046 | -0.118 |
| delta_Rv3717 | 0.313 | -0.234 |
| delta_Rv3811 | -0.351 | -0.012 |
| delta_Rv0954 | -0.827 | 0.368 |
| PonA1 | -0.511 | 0.047 |
| EccD1_KO | -1.73 | -0.023 |
| EspI_KO | 2.236 | 0.856 |
| PE35_KO | 2.08 | 0.712 |
| PPE68_KO | 2.281 | 0.579 |
| glycerol2 | -2.996 | -0.961 |
| lignocerate | -1.891 | -0.745 |
| oleate | -3.031 | -1.15 |
| phosphatidylcholine | -2.801 | -0.916 |
| acetate | -3.554 | -0.163 |
| glucAc | -2.21 | 0.088 |
| Rv0950ko | -0.407 | 0.229 |
| Rv1096ko | -0.407 | 0.712 |
| Rv3684ko | -2.358 | -0.364 |
| delta_otsA_trehalose | 2.546 | -0.052 |