Top 10 genes with highest correlation to Rv2881c/cdsA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1673c/- | (cc=0.5914) | info on Rv1673c/- |
| Rv1962A/vapB35 | (cc=0.5888) | info on Rv1962A/vapB35 |
| Rv2673/aftC | (cc=0.5634) | info on Rv2673/aftC |
| Rv2428/ahpC | (cc=0.553) | info on Rv2428/ahpC |
| Rv2303c/- | (cc=0.549) | info on Rv2303c/- |
| Rv2775/- | (cc=0.5309) | info on Rv2775/- |
| Rv2818c/- | (cc=0.5234) | info on Rv2818c/- |
| Rv2063/mazE7 | (cc=0.5188) | info on Rv2063/mazE7 |
| Rv2500c/fadE19 | (cc=0.5124) | info on Rv2500c/fadE19 |
| Rv2267c/- | (cc=0.5086) | info on Rv2267c/- |
Correlation of Rv2881c/cdsA with Rv1962A/vapB35
Normalized LFCs for Rv2881c/cdsA:
(description and provenance of datasets)
| Rv2881c/cdsA | Rv1962A/vapB35 | |
| Fe_supp_jason_reseq | 0.0 | -2.087 |
| low_pH_jason_reseq | 0.284 | 0.751 |
| NO_jason_reseq | -1.42 | -1.016 |
| B6_jason_reseq | -0.103 | -1.721 |
| MHCII_jason_reseq | -0.663 | -1.617 |
| Isoniazid02 | 0.0 | 2.993 |
| Rifampicin4 | 0.0 | 0.249 |
| Ethambutol3 | 0.0 | 2.526 |
| Meropenem3 | 0.0 | 0.248 |
| Vancomycin16 | 0.366 | 0.716 |
| Rv2680_day32 | -0.131 | 1.845 |
| H37Rv_KO_MarP | -0.291 | -0.189 |
| hypoxia_3wks | 0.0 | 0.116 |
| hypoxia_6wks | 0.0 | 0.031 |
| glycerol | -0.202 | 0.0 |
| cholesterol | -0.145 | 0.461 |
| AJ | -0.232 | -0.126 |
| Bibs02 | -0.183 | 0.032 |
| Bibs02c | -0.209 | -1.338 |
| BL6 | -0.125 | 1.12 |
| BL6a | 0.901 | -0.145 |
| BXD01 | 0.328 | 1.863 |
| BXD010 | 1.098 | 0.637 |
| BXD011 | 2.555 | 1.169 |
| BXD03 | 0.0 | 1.383 |
| BXD04 | -0.124 | -0.267 |
| BXD05 | 1.667 | 0.594 |
| BXD06 | 0.687 | 1.383 |
| BXD07 | 0.126 | 0.953 |
| BXD08 | 0.431 | 2.545 |
| BXD09 | 0.802 | 1.258 |
| CAST | 0.581 | -0.706 |
| CCcont | 0.261 | 0.855 |
| DS01 | 0.216 | 1.042 |
| DS02 | 0.704 | -1.32 |
| DS04 | -0.194 | -0.461 |
| DS0c | 0.0 | 0.255 |
| GP01 | 0.564 | 1.804 |
| GP02 | 0.901 | 0.565 |
| GP0c | 1.788 | 1.454 |
| NOD | 1.731 | 1.705 |
| NZO | -0.199 | -2.362 |
| PWK | -0.196 | -0.51 |
| H37Rv_KO_CtpC | 0.637 | 0.43 |
| H37Rv_KO_CtpD | 1.951 | 2.829 |
| H37Rv_KO_Rv1272 | 1.022 | 1.058 |
| H37Rv_KO_SugABC | -0.099 | 0.46 |
| H37Rv_KO_MbtN | -0.103 | -0.34 |
| Trans05 | 2.824 | 2.557 |
| macrophage_unactivated | -0.398 | 0.051 |
| IL1 | -0.78 | -1.109 |
| Rapamycin | -0.387 | -1.746 |
| Tcell | 0.375 | 1.838 |
| GMCSF | -0.333 | -0.882 |
| IFNab | -0.795 | -0.665 |
| IFNg | -0.703 | -0.259 |
| IFNg_GMCSF1 | -0.826 | 0.333 |
| Rv1432_day32 | 0.0 | -0.488 |
| Rv1565c_day32 | 0.0 | -0.177 |
| secA2_input | -0.348 | -1.324 |
| delta_Rv3594 | -0.997 | 0.575 |
| delta_Rv3717 | 0.081 | -0.272 |
| delta_Rv3811 | -1.3 | 0.458 |
| delta_Rv0954 | -0.274 | -0.293 |
| PonA1 | -0.077 | 0.434 |
| EccD1_KO | 1.924 | 2.174 |
| EspI_KO | 0.633 | 1.437 |
| PE35_KO | 3.564 | 2.896 |
| PPE68_KO | 2.121 | 2.377 |
| glycerol2 | 0.104 | 0.113 |
| lignocerate | -0.96 | -0.946 |
| oleate | -0.483 | 1.197 |
| phosphatidylcholine | -0.478 | 0.203 |
| acetate | -1.31 | -0.893 |
| glucAc | -0.456 | -1.917 |
| Rv0950ko | 0.211 | -0.546 |
| Rv1096ko | -0.706 | 0.377 |
| Rv3684ko | -0.766 | -0.593 |
| delta_otsA_trehalose | -0.232 | 0.654 |