Top 10 genes with highest correlation to Rv2871/vapB43:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2758c/vapB21 | (cc=0.5356) | info on Rv2758c/vapB21 |
| Rv0154c/fadE2 | (cc=0.5191) | info on Rv0154c/fadE2 |
| Rv3694c/- | (cc=0.5099) | info on Rv3694c/- |
| Rv2497c/bkdA | (cc=0.4892) | info on Rv2497c/bkdA |
| Rv3342/- | (cc=0.4849) | info on Rv3342/- |
| Rv2038c/- | (cc=0.4663) | info on Rv2038c/- |
| Rv3210c/- | (cc=0.4636) | info on Rv3210c/- |
| Rv3314c/deoA | (cc=0.4622) | info on Rv3314c/deoA |
| Rv0093c/- | (cc=0.4575) | info on Rv0093c/- |
| Rv0260c/- | (cc=0.4572) | info on Rv0260c/- |
Correlation of Rv2871/vapB43 with Rv3314c/deoA
Normalized LFCs for Rv2871/vapB43:
(description and provenance of datasets)
| Rv2871/vapB43 | Rv3314c/deoA | |
| Fe_supp_jason_reseq | -0.188 | -0.672 |
| low_pH_jason_reseq | -0.571 | 0.291 |
| NO_jason_reseq | 0.378 | -0.753 |
| B6_jason_reseq | -1.287 | -1.302 |
| MHCII_jason_reseq | -0.535 | -1.01 |
| Isoniazid02 | -0.438 | -0.217 |
| Rifampicin4 | 0.577 | 0.203 |
| Ethambutol3 | 0.387 | -0.198 |
| Meropenem3 | 0.0 | 1.96 |
| Vancomycin16 | 0.215 | 0.326 |
| Rv2680_day32 | 0.554 | -0.435 |
| H37Rv_KO_MarP | 1.098 | -0.562 |
| hypoxia_3wks | -1.013 | -0.542 |
| hypoxia_6wks | -0.965 | 0.061 |
| glycerol | -1.788 | -0.519 |
| cholesterol | 0.054 | -0.398 |
| AJ | 1.356 | -0.479 |
| Bibs02 | -1.325 | -1.229 |
| Bibs02c | -1.091 | -1.155 |
| BL6 | 0.952 | 0.574 |
| BL6a | 1.158 | -0.254 |
| BXD01 | 1.412 | 0.405 |
| BXD010 | 0.047 | -0.224 |
| BXD011 | 0.947 | -0.284 |
| BXD03 | 0.098 | 0.053 |
| BXD04 | 0.584 | 0.308 |
| BXD05 | 0.603 | 0.018 |
| BXD06 | 1.196 | 0.529 |
| BXD07 | 0.479 | 0.018 |
| BXD08 | 0.75 | 0.783 |
| BXD09 | 0.881 | -0.038 |
| CAST | -0.37 | -0.26 |
| CCcont | 2.347 | 1.179 |
| DS01 | -0.83 | -0.775 |
| DS02 | -2.339 | -0.214 |
| DS04 | 0.207 | -0.249 |
| DS0c | 0.809 | -0.245 |
| GP01 | 0.466 | 0.453 |
| GP02 | -0.603 | -0.387 |
| GP0c | 0.223 | 0.179 |
| NOD | -0.91 | -0.778 |
| NZO | -0.41 | -0.478 |
| PWK | 1.309 | 0.026 |
| H37Rv_KO_CtpC | 1.905 | 1.041 |
| H37Rv_KO_CtpD | -0.204 | -0.088 |
| H37Rv_KO_Rv1272 | 0.995 | 0.841 |
| H37Rv_KO_SugABC | 2.157 | -0.99 |
| H37Rv_KO_MbtN | 2.291 | 1.025 |
| Trans05 | 0.0 | 1.346 |
| macrophage_unactivated | 1.689 | 0.644 |
| IL1 | 0.795 | 0.789 |
| Rapamycin | 1.826 | 1.961 |
| Tcell | 0.456 | 0.231 |
| GMCSF | 1.135 | 0.187 |
| IFNab | 0.0 | 0.759 |
| IFNg | 1.938 | 0.831 |
| IFNg_GMCSF1 | -0.189 | -0.484 |
| Rv1432_day32 | 0.763 | 1.103 |
| Rv1565c_day32 | 0.684 | 0.859 |
| secA2_input | 0.286 | -0.866 |
| delta_Rv3594 | -1.042 | 0.0 |
| delta_Rv3717 | -0.327 | 0.191 |
| delta_Rv3811 | -1.054 | -0.378 |
| delta_Rv0954 | -1.105 | -0.262 |
| PonA1 | -1.626 | -0.122 |
| EccD1_KO | -0.069 | 0.086 |
| EspI_KO | 1.289 | -0.819 |
| PE35_KO | -1.645 | -0.656 |
| PPE68_KO | -0.656 | -0.72 |
| glycerol2 | 1.361 | 0.038 |
| lignocerate | 1.32 | 0.558 |
| oleate | 0.746 | -1.289 |
| phosphatidylcholine | 1.188 | 0.181 |
| acetate | 2.08 | 0.0 |
| glucAc | 1.459 | 0.302 |
| Rv0950ko | -0.89 | -0.95 |
| Rv1096ko | -0.247 | -0.087 |
| Rv3684ko | 1.225 | -0.386 |
| delta_otsA_trehalose | 0.073 | 0.168 |