Top 10 genes with highest correlation to Rv2871/vapB43:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2758c/vapB21 | (cc=0.5356) | info on Rv2758c/vapB21 |
| Rv0154c/fadE2 | (cc=0.5191) | info on Rv0154c/fadE2 |
| Rv3694c/- | (cc=0.5099) | info on Rv3694c/- |
| Rv2497c/bkdA | (cc=0.4892) | info on Rv2497c/bkdA |
| Rv3342/- | (cc=0.4849) | info on Rv3342/- |
| Rv2038c/- | (cc=0.4663) | info on Rv2038c/- |
| Rv3210c/- | (cc=0.4636) | info on Rv3210c/- |
| Rv3314c/deoA | (cc=0.4622) | info on Rv3314c/deoA |
| Rv0093c/- | (cc=0.4575) | info on Rv0093c/- |
| Rv0260c/- | (cc=0.4572) | info on Rv0260c/- |
Correlation of Rv2871/vapB43 with Rv2758c/vapB21
Normalized LFCs for Rv2871/vapB43:
(description and provenance of datasets)
| Rv2871/vapB43 | Rv2758c/vapB21 | |
| Fe_supp_jason_reseq | -0.188 | 0.709 |
| low_pH_jason_reseq | -0.571 | -1.561 |
| NO_jason_reseq | 0.378 | -0.953 |
| B6_jason_reseq | -1.287 | -2.408 |
| MHCII_jason_reseq | -0.535 | -2.023 |
| Isoniazid02 | -0.438 | -0.383 |
| Rifampicin4 | 0.577 | 0.785 |
| Ethambutol3 | 0.387 | 0.27 |
| Meropenem3 | 0.0 | 1.269 |
| Vancomycin16 | 0.215 | 0.106 |
| Rv2680_day32 | 0.554 | -1.524 |
| H37Rv_KO_MarP | 1.098 | 1.456 |
| hypoxia_3wks | -1.013 | 0.0 |
| hypoxia_6wks | -0.965 | -0.77 |
| glycerol | -1.788 | -0.742 |
| cholesterol | 0.054 | -0.242 |
| AJ | 1.356 | -0.728 |
| Bibs02 | -1.325 | -1.396 |
| Bibs02c | -1.091 | -1.963 |
| BL6 | 0.952 | -0.604 |
| BL6a | 1.158 | -0.423 |
| BXD01 | 1.412 | 0.188 |
| BXD010 | 0.047 | -0.7 |
| BXD011 | 0.947 | 0.14 |
| BXD03 | 0.098 | -0.109 |
| BXD04 | 0.584 | -0.454 |
| BXD05 | 0.603 | -1.141 |
| BXD06 | 1.196 | 0.713 |
| BXD07 | 0.479 | 0.533 |
| BXD08 | 0.75 | -0.488 |
| BXD09 | 0.881 | 1.42 |
| CAST | -0.37 | -1.582 |
| CCcont | 2.347 | 1.808 |
| DS01 | -0.83 | -1.292 |
| DS02 | -2.339 | -2.04 |
| DS04 | 0.207 | -2.014 |
| DS0c | 0.809 | 0.313 |
| GP01 | 0.466 | 0.572 |
| GP02 | -0.603 | -0.781 |
| GP0c | 0.223 | -0.799 |
| NOD | -0.91 | -1.38 |
| NZO | -0.41 | -1.225 |
| PWK | 1.309 | -1.84 |
| H37Rv_KO_CtpC | 1.905 | 0.288 |
| H37Rv_KO_CtpD | -0.204 | -1.074 |
| H37Rv_KO_Rv1272 | 0.995 | 1.466 |
| H37Rv_KO_SugABC | 2.157 | -0.929 |
| H37Rv_KO_MbtN | 2.291 | -0.127 |
| Trans05 | 0.0 | -0.41 |
| macrophage_unactivated | 1.689 | 0.9 |
| IL1 | 0.795 | 0.0 |
| Rapamycin | 1.826 | 0.522 |
| Tcell | 0.456 | 1.166 |
| GMCSF | 1.135 | 1.7 |
| IFNab | 0.0 | 0.632 |
| IFNg | 1.938 | 0.762 |
| IFNg_GMCSF1 | -0.189 | -0.446 |
| Rv1432_day32 | 0.763 | 0.0 |
| Rv1565c_day32 | 0.684 | 0.0 |
| secA2_input | 0.286 | 1.739 |
| delta_Rv3594 | -1.042 | -2.164 |
| delta_Rv3717 | -0.327 | -1.194 |
| delta_Rv3811 | -1.054 | -2.318 |
| delta_Rv0954 | -1.105 | -1.043 |
| PonA1 | -1.626 | -0.256 |
| EccD1_KO | -0.069 | -1.51 |
| EspI_KO | 1.289 | -3.679 |
| PE35_KO | -1.645 | -1.339 |
| PPE68_KO | -0.656 | -1.328 |
| glycerol2 | 1.361 | 1.359 |
| lignocerate | 1.32 | 2.159 |
| oleate | 0.746 | -1.791 |
| phosphatidylcholine | 1.188 | 1.443 |
| acetate | 2.08 | 2.031 |
| glucAc | 1.459 | 2.565 |
| Rv0950ko | -0.89 | -0.739 |
| Rv1096ko | -0.247 | -0.582 |
| Rv3684ko | 1.225 | -0.305 |
| delta_otsA_trehalose | 0.073 | -1.336 |