Top 10 genes with highest correlation to Rv2833c/ugpB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2481c/- | (cc=0.6002) | info on Rv2481c/- |
| Rv2456c/- | (cc=0.5803) | info on Rv2456c/- |
| Rv2562/- | (cc=0.5305) | info on Rv2562/- |
| Rv0188/- | (cc=0.5302) | info on Rv0188/- |
| Rv0844c/narL | (cc=0.5279) | info on Rv0844c/narL |
| Rv0463/- | (cc=0.5193) | info on Rv0463/- |
| Rv1471/trxB1 | (cc=0.5189) | info on Rv1471/trxB1 |
| Rv0055/rpsR1 | (cc=0.5066) | info on Rv0055/rpsR1 |
| Rv1076/lipU | (cc=0.5061) | info on Rv1076/lipU |
| Rv0944/- | (cc=0.4935) | info on Rv0944/- |
Correlation of Rv2833c/ugpB with Rv1471/trxB1
Normalized LFCs for Rv2833c/ugpB:
(description and provenance of datasets)
| Rv2833c/ugpB | Rv1471/trxB1 | |
| Fe_supp_jason_reseq | -1.047 | -1.092 |
| low_pH_jason_reseq | -0.855 | -0.035 |
| NO_jason_reseq | -0.496 | -0.242 |
| B6_jason_reseq | -2.495 | -1.221 |
| MHCII_jason_reseq | -1.705 | -2.743 |
| Isoniazid02 | 0.323 | 0.432 |
| Rifampicin4 | 1.283 | -1.313 |
| Ethambutol3 | 0.505 | 0.133 |
| Meropenem3 | 0.497 | -0.465 |
| Vancomycin16 | 0.939 | 0.34 |
| Rv2680_day32 | 1.035 | 0.343 |
| H37Rv_KO_MarP | -0.188 | -0.665 |
| hypoxia_3wks | 0.0 | -1.188 |
| hypoxia_6wks | -0.234 | 1.232 |
| glycerol | -0.693 | 2.319 |
| cholesterol | 0.552 | 0.532 |
| AJ | -0.541 | 1.743 |
| Bibs02 | -0.736 | -0.158 |
| Bibs02c | -1.429 | -0.446 |
| BL6 | 1.972 | 3.592 |
| BL6a | 1.025 | 2.91 |
| BXD01 | 0.8 | 0.812 |
| BXD010 | 1.237 | 2.067 |
| BXD011 | 0.812 | 2.63 |
| BXD03 | 1.088 | 2.354 |
| BXD04 | 0.67 | 2.435 |
| BXD05 | 0.391 | 3.599 |
| BXD06 | 0.91 | 2.481 |
| BXD07 | 1.167 | 2.685 |
| BXD08 | 1.509 | 2.983 |
| BXD09 | 1.334 | 2.301 |
| CAST | 2.478 | 1.605 |
| CCcont | 1.651 | 2.453 |
| DS01 | -0.551 | 1.324 |
| DS02 | 0.699 | 0.961 |
| DS04 | -0.905 | -0.932 |
| DS0c | -0.506 | -0.613 |
| GP01 | -0.086 | -1.378 |
| GP02 | -0.568 | -1.161 |
| GP0c | -0.237 | -1.684 |
| NOD | 0.0 | -0.26 |
| NZO | 0.309 | 1.604 |
| PWK | -0.915 | 2.083 |
| H37Rv_KO_CtpC | 1.177 | 3.258 |
| H37Rv_KO_CtpD | -1.086 | 1.628 |
| H37Rv_KO_Rv1272 | 1.385 | 3.897 |
| H37Rv_KO_SugABC | -0.949 | 1.335 |
| H37Rv_KO_MbtN | -0.625 | -0.408 |
| Trans05 | 1.851 | 1.81 |
| macrophage_unactivated | 0.65 | -0.211 |
| IL1 | 0.392 | 1.124 |
| Rapamycin | 0.921 | 0.328 |
| Tcell | 0.903 | 0.961 |
| GMCSF | 0.731 | -1.188 |
| IFNab | 0.163 | 0.432 |
| IFNg | 0.216 | 1.457 |
| IFNg_GMCSF1 | 0.17 | 0.0 |
| Rv1432_day32 | -0.961 | 0.0 |
| Rv1565c_day32 | -0.24 | 1.087 |
| secA2_input | 0.095 | -0.266 |
| delta_Rv3594 | -0.402 | 0.089 |
| delta_Rv3717 | -0.802 | 2.29 |
| delta_Rv3811 | -0.651 | 2.127 |
| delta_Rv0954 | -0.45 | 1.957 |
| PonA1 | -0.799 | -0.608 |
| EccD1_KO | -1.47 | -0.062 |
| EspI_KO | 0.091 | 0.305 |
| PE35_KO | 0.443 | 1.003 |
| PPE68_KO | 0.202 | 1.328 |
| glycerol2 | 0.873 | 3.213 |
| lignocerate | 1.376 | 3.899 |
| oleate | 0.489 | 0.688 |
| phosphatidylcholine | 1.108 | 3.039 |
| acetate | 1.079 | 5.878 |
| glucAc | 1.205 | 4.496 |
| Rv0950ko | 0.582 | 1.481 |
| Rv1096ko | 0.995 | 0.552 |
| Rv3684ko | 1.588 | -0.354 |
| delta_otsA_trehalose | -1.327 | -0.27 |