Top 10 genes with highest correlation to Rv2832c/ugpC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2801c/mazF9 | (cc=0.4461) | info on Rv2801c/mazF9 |
| Rv2131c/cysQ | (cc=0.4442) | info on Rv2131c/cysQ |
| Rv0998/- | (cc=0.4407) | info on Rv0998/- |
| Rv0732/secY | (cc=0.4366) | info on Rv0732/secY |
| Rv2164c/- | (cc=0.4356) | info on Rv2164c/- |
| Rv1253/deaD | (cc=0.4272) | info on Rv1253/deaD |
| Rv1365c/rsfA | (cc=0.4263) | info on Rv1365c/rsfA |
| Rv2446c/- | (cc=0.4252) | info on Rv2446c/- |
| Rv1745c/idi | (cc=0.4191) | info on Rv1745c/idi |
| Rv1421/- | (cc=0.4108) | info on Rv1421/- |
Correlation of Rv2832c/ugpC with Rv0998/-
Normalized LFCs for Rv2832c/ugpC:
(description and provenance of datasets)
| Rv2832c/ugpC | Rv0998/- | |
| Fe_supp_jason_reseq | -1.304 | 3.157 |
| low_pH_jason_reseq | 0.999 | 0.231 |
| NO_jason_reseq | 0.625 | 0.0 |
| B6_jason_reseq | -0.474 | 0.153 |
| MHCII_jason_reseq | 0.63 | 0.0 |
| Isoniazid02 | 0.124 | -1.641 |
| Rifampicin4 | -0.504 | -0.68 |
| Ethambutol3 | -0.168 | 0.541 |
| Meropenem3 | -0.053 | 1.265 |
| Vancomycin16 | 0.114 | -0.889 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | -0.207 | -1.233 |
| hypoxia_3wks | 0.0 | 4.103 |
| hypoxia_6wks | 0.455 | -2.211 |
| glycerol | 1.102 | 4.299 |
| cholesterol | -0.703 | 2.403 |
| AJ | 0.96 | -1.425 |
| Bibs02 | 0.481 | 1.216 |
| Bibs02c | 1.32 | 2.004 |
| BL6 | 1.555 | -0.768 |
| BL6a | 0.61 | 0.762 |
| BXD01 | 0.884 | -0.8 |
| BXD010 | 0.394 | -0.787 |
| BXD011 | 0.626 | -0.655 |
| BXD03 | 0.0 | -0.831 |
| BXD04 | 0.037 | -0.76 |
| BXD05 | 1.215 | -0.457 |
| BXD06 | 0.187 | -0.82 |
| BXD07 | 0.851 | -0.851 |
| BXD08 | 0.467 | -0.817 |
| BXD09 | 1.37 | -0.863 |
| CAST | -1.011 | -0.782 |
| CCcont | 0.393 | 2.422 |
| DS01 | 2.132 | 2.421 |
| DS02 | 0.246 | 0.0 |
| DS04 | 1.726 | 1.903 |
| DS0c | 0.358 | 2.176 |
| GP01 | -0.433 | -0.607 |
| GP02 | 1.414 | -0.511 |
| GP0c | 0.457 | -0.799 |
| NOD | -1.199 | -0.591 |
| NZO | 0.116 | -1.225 |
| PWK | 0.604 | -1.205 |
| H37Rv_KO_CtpC | 0.672 | -0.552 |
| H37Rv_KO_CtpD | -1.213 | -0.43 |
| H37Rv_KO_Rv1272 | -1.065 | -0.725 |
| H37Rv_KO_SugABC | -1.108 | 0.254 |
| H37Rv_KO_MbtN | -0.406 | -0.127 |
| Trans05 | -1.461 | -0.672 |
| macrophage_unactivated | 0.237 | -0.884 |
| IL1 | -0.842 | -1.863 |
| Rapamycin | 0.157 | -1.927 |
| Tcell | -0.085 | -0.912 |
| GMCSF | 0.626 | -2.022 |
| IFNab | 0.302 | -0.547 |
| IFNg | 1.074 | -1.678 |
| IFNg_GMCSF1 | 0.314 | -2.407 |
| Rv1432_day32 | 0.0 | -0.343 |
| Rv1565c_day32 | 2.786 | 1.071 |
| secA2_input | 1.005 | 0.302 |
| delta_Rv3594 | 2.022 | 4.054 |
| delta_Rv3717 | 0.901 | 4.344 |
| delta_Rv3811 | 0.97 | 3.679 |
| delta_Rv0954 | 0.665 | 2.505 |
| PonA1 | 1.663 | 2.734 |
| EccD1_KO | -1.01 | -3.588 |
| EspI_KO | -3.314 | -1.711 |
| PE35_KO | -0.184 | -1.928 |
| PPE68_KO | -1.232 | -2.473 |
| glycerol2 | -1.488 | -4.482 |
| lignocerate | -1.765 | -4.062 |
| oleate | -0.522 | -4.73 |
| phosphatidylcholine | -0.877 | -4.143 |
| acetate | -1.376 | -0.023 |
| glucAc | -1.442 | 0.043 |
| Rv0950ko | -0.736 | -3.435 |
| Rv1096ko | 0.0 | -2.781 |
| Rv3684ko | -1.464 | -2.967 |
| delta_otsA_trehalose | 0.181 | -0.788 |