Top 10 genes with highest correlation to Rv2826c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0540/- | (cc=0.5725) | info on Rv0540/- |
| Rv1263/amiB2 | (cc=0.5457) | info on Rv1263/amiB2 |
| Rv2232/ptkA | (cc=0.5433) | info on Rv2232/ptkA |
| Rv3731/ligC | (cc=0.5121) | info on Rv3731/ligC |
| Rv3506/fadD17 | (cc=0.5121) | info on Rv3506/fadD17 |
| Rv0359/- | (cc=0.5088) | info on Rv0359/- |
| Rv0836c/- | (cc=0.5059) | info on Rv0836c/- |
| Rv2559c/- | (cc=0.5056) | info on Rv2559c/- |
| Rv3114/- | (cc=0.5046) | info on Rv3114/- |
| Rv1775/- | (cc=0.4945) | info on Rv1775/- |
Correlation of Rv2826c/- with Rv3731/ligC
Normalized LFCs for Rv2826c/-:
(description and provenance of datasets)
| Rv2826c/- | Rv3731/ligC | |
| Fe_supp_jason_reseq | -1.634 | -0.142 |
| low_pH_jason_reseq | -0.102 | 0.313 |
| NO_jason_reseq | -0.378 | -0.903 |
| B6_jason_reseq | -0.895 | -0.138 |
| MHCII_jason_reseq | -0.351 | 0.414 |
| Isoniazid02 | -0.498 | -0.073 |
| Rifampicin4 | -0.56 | -0.328 |
| Ethambutol3 | -0.781 | 1.025 |
| Meropenem3 | 2.933 | 0.27 |
| Vancomycin16 | -0.138 | 0.016 |
| Rv2680_day32 | -0.069 | 0.331 |
| H37Rv_KO_MarP | -0.341 | 0.103 |
| hypoxia_3wks | 0.443 | 0.024 |
| hypoxia_6wks | -0.251 | -0.223 |
| glycerol | -0.404 | -0.418 |
| cholesterol | 0.089 | -0.621 |
| AJ | -1.498 | -0.338 |
| Bibs02 | 1.178 | 0.019 |
| Bibs02c | 0.79 | 0.464 |
| BL6 | -0.851 | 0.034 |
| BL6a | 0.408 | 0.26 |
| BXD01 | -1.029 | -0.614 |
| BXD010 | -2.727 | -0.57 |
| BXD011 | -0.552 | 0.201 |
| BXD03 | -0.46 | 0.082 |
| BXD04 | -0.737 | 0.03 |
| BXD05 | -1.229 | -0.449 |
| BXD06 | 0.486 | -0.184 |
| BXD07 | -1.493 | -0.468 |
| BXD08 | -1.025 | -0.076 |
| BXD09 | -1.224 | -0.378 |
| CAST | -1.094 | -0.487 |
| CCcont | -1.77 | -0.463 |
| DS01 | 0.284 | 0.228 |
| DS02 | -0.143 | 0.14 |
| DS04 | -0.367 | 0.034 |
| DS0c | -0.387 | 0.438 |
| GP01 | 0.427 | 0.108 |
| GP02 | 1.211 | 0.826 |
| GP0c | -0.599 | 0.209 |
| NOD | -1.132 | -0.381 |
| NZO | 0.568 | -0.405 |
| PWK | -0.072 | -0.027 |
| H37Rv_KO_CtpC | -0.36 | 0.141 |
| H37Rv_KO_CtpD | -2.251 | -0.816 |
| H37Rv_KO_Rv1272 | -0.841 | 0.297 |
| H37Rv_KO_SugABC | 0.832 | -0.479 |
| H37Rv_KO_MbtN | -1.165 | 0.921 |
| Trans05 | 0.707 | -0.449 |
| macrophage_unactivated | -4.141 | -1.206 |
| IL1 | -1.391 | -0.427 |
| Rapamycin | -3.069 | -0.239 |
| Tcell | -0.857 | -0.89 |
| GMCSF | -1.79 | -0.053 |
| IFNab | -2.249 | -0.662 |
| IFNg | -1.483 | -0.863 |
| IFNg_GMCSF1 | -0.534 | -0.616 |
| Rv1432_day32 | 0.252 | 0.31 |
| Rv1565c_day32 | -1.434 | 0.13 |
| secA2_input | 0.725 | 0.142 |
| delta_Rv3594 | -0.82 | 0.038 |
| delta_Rv3717 | -0.05 | 0.039 |
| delta_Rv3811 | -0.388 | 0.44 |
| delta_Rv0954 | -0.262 | 0.309 |
| PonA1 | -0.929 | 0.14 |
| EccD1_KO | -1.694 | 0.033 |
| EspI_KO | -1.109 | 0.322 |
| PE35_KO | -0.318 | -0.166 |
| PPE68_KO | -0.627 | -0.41 |
| glycerol2 | 0.119 | 0.664 |
| lignocerate | -0.408 | 0.412 |
| oleate | 0.301 | 0.491 |
| phosphatidylcholine | 0.0 | 0.602 |
| acetate | -0.151 | 0.951 |
| glucAc | -0.569 | 0.247 |
| Rv0950ko | 0.862 | 0.929 |
| Rv1096ko | 2.054 | 0.663 |
| Rv3684ko | 1.808 | 0.914 |
| delta_otsA_trehalose | 0.524 | 1.783 |