Top 10 genes with highest correlation to Rv2826c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0540/- | (cc=0.5725) | info on Rv0540/- |
| Rv1263/amiB2 | (cc=0.5457) | info on Rv1263/amiB2 |
| Rv2232/ptkA | (cc=0.5433) | info on Rv2232/ptkA |
| Rv3731/ligC | (cc=0.5121) | info on Rv3731/ligC |
| Rv3506/fadD17 | (cc=0.5121) | info on Rv3506/fadD17 |
| Rv0359/- | (cc=0.5088) | info on Rv0359/- |
| Rv0836c/- | (cc=0.5059) | info on Rv0836c/- |
| Rv2559c/- | (cc=0.5056) | info on Rv2559c/- |
| Rv3114/- | (cc=0.5046) | info on Rv3114/- |
| Rv1775/- | (cc=0.4945) | info on Rv1775/- |
Correlation of Rv2826c/- with Rv1263/amiB2
Normalized LFCs for Rv2826c/-:
(description and provenance of datasets)
| Rv2826c/- | Rv1263/amiB2 | |
| Fe_supp_jason_reseq | -1.634 | -1.514 |
| low_pH_jason_reseq | -0.102 | -1.233 |
| NO_jason_reseq | -0.378 | 0.845 |
| B6_jason_reseq | -0.895 | -1.156 |
| MHCII_jason_reseq | -0.351 | -0.899 |
| Isoniazid02 | -0.498 | 1.212 |
| Rifampicin4 | -0.56 | -0.07 |
| Ethambutol3 | -0.781 | 0.873 |
| Meropenem3 | 2.933 | 0.047 |
| Vancomycin16 | -0.138 | 0.034 |
| Rv2680_day32 | -0.069 | 0.23 |
| H37Rv_KO_MarP | -0.341 | 0.087 |
| hypoxia_3wks | 0.443 | 0.171 |
| hypoxia_6wks | -0.251 | 0.219 |
| glycerol | -0.404 | -0.935 |
| cholesterol | 0.089 | -0.328 |
| AJ | -1.498 | -0.227 |
| Bibs02 | 1.178 | 0.061 |
| Bibs02c | 0.79 | 0.477 |
| BL6 | -0.851 | -0.365 |
| BL6a | 0.408 | -0.789 |
| BXD01 | -1.029 | -1.172 |
| BXD010 | -2.727 | -1.205 |
| BXD011 | -0.552 | -0.89 |
| BXD03 | -0.46 | -2.042 |
| BXD04 | -0.737 | -1.217 |
| BXD05 | -1.229 | -1.185 |
| BXD06 | 0.486 | -0.747 |
| BXD07 | -1.493 | -0.678 |
| BXD08 | -1.025 | -1.021 |
| BXD09 | -1.224 | -0.937 |
| CAST | -1.094 | 0.526 |
| CCcont | -1.77 | -0.772 |
| DS01 | 0.284 | -0.438 |
| DS02 | -0.143 | -0.447 |
| DS04 | -0.367 | 0.204 |
| DS0c | -0.387 | 0.435 |
| GP01 | 0.427 | 0.496 |
| GP02 | 1.211 | 1.219 |
| GP0c | -0.599 | -0.068 |
| NOD | -1.132 | -0.534 |
| NZO | 0.568 | 0.27 |
| PWK | -0.072 | -0.051 |
| H37Rv_KO_CtpC | -0.36 | 0.9 |
| H37Rv_KO_CtpD | -2.251 | -0.62 |
| H37Rv_KO_Rv1272 | -0.841 | -0.037 |
| H37Rv_KO_SugABC | 0.832 | 1.537 |
| H37Rv_KO_MbtN | -1.165 | -0.907 |
| Trans05 | 0.707 | 0.359 |
| macrophage_unactivated | -4.141 | -2.238 |
| IL1 | -1.391 | -1.213 |
| Rapamycin | -3.069 | -1.771 |
| Tcell | -0.857 | -1.118 |
| GMCSF | -1.79 | -0.425 |
| IFNab | -2.249 | -0.665 |
| IFNg | -1.483 | -0.233 |
| IFNg_GMCSF1 | -0.534 | -0.569 |
| Rv1432_day32 | 0.252 | 0.428 |
| Rv1565c_day32 | -1.434 | 0.069 |
| secA2_input | 0.725 | 1.204 |
| delta_Rv3594 | -0.82 | -0.904 |
| delta_Rv3717 | -0.05 | -0.325 |
| delta_Rv3811 | -0.388 | -0.095 |
| delta_Rv0954 | -0.262 | -0.669 |
| PonA1 | -0.929 | -0.89 |
| EccD1_KO | -1.694 | -0.789 |
| EspI_KO | -1.109 | -0.819 |
| PE35_KO | -0.318 | -0.61 |
| PPE68_KO | -0.627 | -0.969 |
| glycerol2 | 0.119 | 0.265 |
| lignocerate | -0.408 | 0.736 |
| oleate | 0.301 | 0.196 |
| phosphatidylcholine | 0.0 | 0.591 |
| acetate | -0.151 | 0.973 |
| glucAc | -0.569 | 0.719 |
| Rv0950ko | 0.862 | -0.63 |
| Rv1096ko | 2.054 | 0.398 |
| Rv3684ko | 1.808 | 0.0 |
| delta_otsA_trehalose | 0.524 | -0.327 |