Top 10 genes with highest correlation to Rv2826c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0540/- | (cc=0.5725) | info on Rv0540/- |
| Rv1263/amiB2 | (cc=0.5457) | info on Rv1263/amiB2 |
| Rv2232/ptkA | (cc=0.5433) | info on Rv2232/ptkA |
| Rv3731/ligC | (cc=0.5121) | info on Rv3731/ligC |
| Rv3506/fadD17 | (cc=0.5121) | info on Rv3506/fadD17 |
| Rv0359/- | (cc=0.5088) | info on Rv0359/- |
| Rv0836c/- | (cc=0.5059) | info on Rv0836c/- |
| Rv2559c/- | (cc=0.5056) | info on Rv2559c/- |
| Rv3114/- | (cc=0.5046) | info on Rv3114/- |
| Rv1775/- | (cc=0.4945) | info on Rv1775/- |
Correlation of Rv2826c/- with Rv2232/ptkA
Normalized LFCs for Rv2826c/-:
(description and provenance of datasets)
| Rv2826c/- | Rv2232/ptkA | |
| Fe_supp_jason_reseq | -1.634 | -1.782 |
| low_pH_jason_reseq | -0.102 | -0.626 |
| NO_jason_reseq | -0.378 | 0.108 |
| B6_jason_reseq | -0.895 | 0.489 |
| MHCII_jason_reseq | -0.351 | 1.444 |
| Isoniazid02 | -0.498 | 0.455 |
| Rifampicin4 | -0.56 | -0.439 |
| Ethambutol3 | -0.781 | 0.638 |
| Meropenem3 | 2.933 | 1.542 |
| Vancomycin16 | -0.138 | -0.43 |
| Rv2680_day32 | -0.069 | 0.947 |
| H37Rv_KO_MarP | -0.341 | 1.226 |
| hypoxia_3wks | 0.443 | 0.112 |
| hypoxia_6wks | -0.251 | -0.311 |
| glycerol | -0.404 | 1.271 |
| cholesterol | 0.089 | 0.0 |
| AJ | -1.498 | 0.156 |
| Bibs02 | 1.178 | 0.588 |
| Bibs02c | 0.79 | 1.441 |
| BL6 | -0.851 | -2.396 |
| BL6a | 0.408 | 0.209 |
| BXD01 | -1.029 | -0.608 |
| BXD010 | -2.727 | -1.641 |
| BXD011 | -0.552 | -0.741 |
| BXD03 | -0.46 | -2.017 |
| BXD04 | -0.737 | 0.131 |
| BXD05 | -1.229 | -0.462 |
| BXD06 | 0.486 | -0.335 |
| BXD07 | -1.493 | -0.448 |
| BXD08 | -1.025 | -0.357 |
| BXD09 | -1.224 | -1.346 |
| CAST | -1.094 | 0.517 |
| CCcont | -1.77 | -2.063 |
| DS01 | 0.284 | 0.71 |
| DS02 | -0.143 | 0.654 |
| DS04 | -0.367 | 0.583 |
| DS0c | -0.387 | 0.06 |
| GP01 | 0.427 | -0.164 |
| GP02 | 1.211 | 0.648 |
| GP0c | -0.599 | -0.421 |
| NOD | -1.132 | 0.604 |
| NZO | 0.568 | 0.309 |
| PWK | -0.072 | -0.492 |
| H37Rv_KO_CtpC | -0.36 | -0.466 |
| H37Rv_KO_CtpD | -2.251 | -1.686 |
| H37Rv_KO_Rv1272 | -0.841 | -0.257 |
| H37Rv_KO_SugABC | 0.832 | 0.529 |
| H37Rv_KO_MbtN | -1.165 | -1.024 |
| Trans05 | 0.707 | -2.026 |
| macrophage_unactivated | -4.141 | -3.592 |
| IL1 | -1.391 | -4.547 |
| Rapamycin | -3.069 | -3.67 |
| Tcell | -0.857 | -2.401 |
| GMCSF | -1.79 | -2.572 |
| IFNab | -2.249 | -2.098 |
| IFNg | -1.483 | -2.603 |
| IFNg_GMCSF1 | -0.534 | -2.181 |
| Rv1432_day32 | 0.252 | 1.119 |
| Rv1565c_day32 | -1.434 | -0.24 |
| secA2_input | 0.725 | 0.969 |
| delta_Rv3594 | -0.82 | -1.048 |
| delta_Rv3717 | -0.05 | -0.394 |
| delta_Rv3811 | -0.388 | -0.498 |
| delta_Rv0954 | -0.262 | -1.16 |
| PonA1 | -0.929 | 0.227 |
| EccD1_KO | -1.694 | -0.388 |
| EspI_KO | -1.109 | 1.8 |
| PE35_KO | -0.318 | -0.254 |
| PPE68_KO | -0.627 | 0.749 |
| glycerol2 | 0.119 | -1.354 |
| lignocerate | -0.408 | -1.695 |
| oleate | 0.301 | -0.315 |
| phosphatidylcholine | 0.0 | -1.217 |
| acetate | -0.151 | -1.445 |
| glucAc | -0.569 | -1.306 |
| Rv0950ko | 0.862 | 0.078 |
| Rv1096ko | 2.054 | -0.793 |
| Rv3684ko | 1.808 | 0.0 |
| delta_otsA_trehalose | 0.524 | 0.83 |