Top 10 genes with highest correlation to Rv2822c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1817/- | (cc=0.7829) | info on Rv1817/- |
| Rv2848c/cobB | (cc=0.7105) | info on Rv2848c/cobB |
| Rv2113/- | (cc=0.6508) | info on Rv2113/- |
| Rv0453/PPE11 | (cc=0.6223) | info on Rv0453/PPE11 |
| Rv3815c/- | (cc=0.5973) | info on Rv3815c/- |
| Rv0159c/PE3 | (cc=0.5468) | info on Rv0159c/PE3 |
| Rv3862c/whiB6 | (cc=0.4468) | info on Rv3862c/whiB6 |
| Rv1480/- | (cc=0.4429) | info on Rv1480/- |
| Rv1185c/fadD21 | (cc=0.434) | info on Rv1185c/fadD21 |
| Rv3685c/cyp137 | (cc=0.4255) | info on Rv3685c/cyp137 |
Correlation of Rv2822c/- with Rv1480/-
Normalized LFCs for Rv2822c/-:
(description and provenance of datasets)
| Rv2822c/- | Rv1480/- | |
| Fe_supp_jason_reseq | -0.535 | -0.189 |
| low_pH_jason_reseq | -0.621 | -0.93 |
| NO_jason_reseq | -0.753 | -2.94 |
| B6_jason_reseq | -0.852 | -1.927 |
| MHCII_jason_reseq | -0.363 | -0.503 |
| Isoniazid02 | 1.998 | 1.924 |
| Rifampicin4 | -0.046 | 0.712 |
| Ethambutol3 | -0.299 | 0.32 |
| Meropenem3 | -0.32 | 0.454 |
| Vancomycin16 | 0.268 | 1.287 |
| Rv2680_day32 | -0.687 | 0.578 |
| H37Rv_KO_MarP | -0.196 | -1.161 |
| hypoxia_3wks | 0.582 | -0.678 |
| hypoxia_6wks | -0.338 | -0.904 |
| glycerol | 0.206 | 2.319 |
| cholesterol | 0.528 | 0.24 |
| AJ | -0.198 | -0.671 |
| Bibs02 | -0.109 | 0.923 |
| Bibs02c | 0.364 | 0.347 |
| BL6 | -0.479 | -0.699 |
| BL6a | -0.135 | -0.573 |
| BXD01 | 0.199 | -1.449 |
| BXD010 | -0.741 | -1.425 |
| BXD011 | -0.632 | -1.175 |
| BXD03 | 0.326 | -1.03 |
| BXD04 | -1.13 | -1.376 |
| BXD05 | -0.964 | -1.497 |
| BXD06 | -0.717 | -1.231 |
| BXD07 | -0.515 | -1.054 |
| BXD08 | -0.91 | -0.916 |
| BXD09 | -0.625 | -1.07 |
| CAST | 0.702 | -0.357 |
| CCcont | -0.169 | 0.154 |
| DS01 | -0.267 | -1.177 |
| DS02 | 0.106 | 0.077 |
| DS04 | -1.041 | -1.477 |
| DS0c | 0.423 | -1.494 |
| GP01 | -0.247 | -0.91 |
| GP02 | -0.435 | -0.465 |
| GP0c | 0.083 | -0.808 |
| NOD | 0.391 | -0.257 |
| NZO | 0.727 | -1.374 |
| PWK | -0.151 | -1.988 |
| H37Rv_KO_CtpC | 0.454 | -1.498 |
| H37Rv_KO_CtpD | -1.563 | -1.409 |
| H37Rv_KO_Rv1272 | 0.133 | -1.569 |
| H37Rv_KO_SugABC | 1.101 | -0.831 |
| H37Rv_KO_MbtN | -0.539 | 0.835 |
| Trans05 | 0.307 | -1.454 |
| macrophage_unactivated | 1.171 | 1.474 |
| IL1 | 1.812 | 0.801 |
| Rapamycin | 1.967 | 1.04 |
| Tcell | -4.412 | -1.639 |
| GMCSF | 1.679 | 0.713 |
| IFNab | 2.428 | 2.476 |
| IFNg | 1.898 | 1.486 |
| IFNg_GMCSF1 | 2.231 | 4.258 |
| Rv1432_day32 | 0.179 | 0.0 |
| Rv1565c_day32 | -0.622 | 0.0 |
| secA2_input | -0.308 | 0.56 |
| delta_Rv3594 | 1.222 | -1.077 |
| delta_Rv3717 | -0.747 | -1.57 |
| delta_Rv3811 | 0.805 | -0.46 |
| delta_Rv0954 | 0.291 | -1.018 |
| PonA1 | 0.384 | -2.461 |
| EccD1_KO | -1.322 | -4.019 |
| EspI_KO | 0.297 | -2.133 |
| PE35_KO | 1.07 | -1.706 |
| PPE68_KO | 1.174 | -2.393 |
| glycerol2 | 0.143 | 0.0 |
| lignocerate | 0.095 | 0.32 |
| oleate | 0.145 | 0.0 |
| phosphatidylcholine | 0.2 | 0.193 |
| acetate | -0.136 | 1.662 |
| glucAc | -0.206 | 1.034 |
| Rv0950ko | -1.423 | 0.347 |
| Rv1096ko | -1.086 | 0.347 |
| Rv3684ko | -0.806 | 0.0 |
| delta_otsA_trehalose | -0.711 | 0.0 |