Top 10 genes with highest correlation to Rv2811/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1773c/- | (cc=0.571) | info on Rv1773c/- |
| Rv0036c/- | (cc=0.5483) | info on Rv0036c/- |
| Rv1839c/vapB13 | (cc=0.5465) | info on Rv1839c/vapB13 |
| Rv0621/- | (cc=0.521) | info on Rv0621/- |
| Rv2917/- | (cc=0.4978) | info on Rv2917/- |
| Rv2226/- | (cc=0.4921) | info on Rv2226/- |
| Rv1555/frdD | (cc=0.4843) | info on Rv1555/frdD |
| Rv0377/- | (cc=0.4818) | info on Rv0377/- |
| Rv0406c/- | (cc=0.4799) | info on Rv0406c/- |
| Rv1657/argR | (cc=0.474) | info on Rv1657/argR |
Correlation of Rv2811/- with Rv0406c/-
Normalized LFCs for Rv2811/-:
(description and provenance of datasets)
| Rv2811/- | Rv0406c/- | |
| Fe_supp_jason_reseq | -0.027 | 1.271 |
| low_pH_jason_reseq | -3.097 | -0.669 |
| NO_jason_reseq | -2.959 | -2.746 |
| B6_jason_reseq | 0.577 | -0.444 |
| MHCII_jason_reseq | -0.261 | 0.577 |
| Isoniazid02 | 0.403 | 0.662 |
| Rifampicin4 | 0.991 | -1.034 |
| Ethambutol3 | 0.161 | 0.355 |
| Meropenem3 | 1.502 | 0.512 |
| Vancomycin16 | 0.072 | 0.801 |
| Rv2680_day32 | -3.829 | -1.486 |
| H37Rv_KO_MarP | -0.119 | -1.834 |
| hypoxia_3wks | 0.443 | -1.376 |
| hypoxia_6wks | -0.583 | -1.56 |
| glycerol | 2.24 | 0.762 |
| cholesterol | 0.015 | 0.333 |
| AJ | -1.321 | -1.55 |
| Bibs02 | 1.454 | -0.538 |
| Bibs02c | -1.651 | 0.203 |
| BL6 | -3.01 | -2.306 |
| BL6a | -1.092 | -0.913 |
| BXD01 | 0.066 | -1.496 |
| BXD010 | -2.371 | -2.642 |
| BXD011 | -1.793 | -1.921 |
| BXD03 | -0.722 | -2.456 |
| BXD04 | 0.135 | -2.246 |
| BXD05 | -0.628 | -3.033 |
| BXD06 | -0.365 | -2.285 |
| BXD07 | -0.669 | -2.857 |
| BXD08 | -0.437 | -1.232 |
| BXD09 | -0.483 | -2.371 |
| CAST | -1.528 | -2.002 |
| CCcont | -3.444 | -0.757 |
| DS01 | 1.28 | 1.316 |
| DS02 | 0.046 | 1.18 |
| DS04 | 1.435 | 1.31 |
| DS0c | 0.068 | 1.139 |
| GP01 | -2.376 | -2.109 |
| GP02 | -1.774 | -1.808 |
| GP0c | -2.057 | -1.088 |
| NOD | -0.613 | -1.246 |
| NZO | -0.152 | -2.349 |
| PWK | -0.239 | -1.384 |
| H37Rv_KO_CtpC | -0.731 | -0.785 |
| H37Rv_KO_CtpD | -2.199 | -1.885 |
| H37Rv_KO_Rv1272 | -0.777 | -1.52 |
| H37Rv_KO_SugABC | -1.477 | -2.115 |
| H37Rv_KO_MbtN | 0.131 | -2.24 |
| Trans05 | 0.154 | -1.893 |
| macrophage_unactivated | -0.439 | 0.496 |
| IL1 | -1.964 | -1.026 |
| Rapamycin | -1.025 | -1.062 |
| Tcell | -0.336 | 0.648 |
| GMCSF | 2.223 | 0.182 |
| IFNab | 0.608 | -0.296 |
| IFNg | -0.275 | -0.543 |
| IFNg_GMCSF1 | -0.324 | -0.638 |
| Rv1432_day32 | 0.18 | -1.724 |
| Rv1565c_day32 | 0.0 | 1.02 |
| secA2_input | 2.403 | 0.498 |
| delta_Rv3594 | -1.762 | -0.854 |
| delta_Rv3717 | 0.867 | -1.193 |
| delta_Rv3811 | 0.369 | -2.061 |
| delta_Rv0954 | 1.96 | 1.234 |
| PonA1 | 0.808 | 0.613 |
| EccD1_KO | 0.875 | 1.779 |
| EspI_KO | 2.681 | 0.299 |
| PE35_KO | 1.006 | 1.639 |
| PPE68_KO | 0.902 | 1.645 |
| glycerol2 | -0.928 | -2.404 |
| lignocerate | -1.777 | -1.577 |
| oleate | 0.028 | -3.281 |
| phosphatidylcholine | -0.885 | -1.172 |
| acetate | -2.065 | 0.101 |
| glucAc | -4.609 | -0.419 |
| Rv0950ko | 1.11 | 0.748 |
| Rv1096ko | 1.27 | 0.591 |
| Rv3684ko | 0.436 | -0.675 |
| delta_otsA_trehalose | -0.101 | 0.133 |