Top 10 genes with highest correlation to Rv2804c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3607c/folB | (cc=0.5178) | info on Rv3607c/folB |
| Rv1646/PE17 | (cc=0.5149) | info on Rv1646/PE17 |
| Rv3026c/- | (cc=0.4881) | info on Rv3026c/- |
| Rv1163/narJ | (cc=0.4738) | info on Rv1163/narJ |
| Rv0985c/mscL | (cc=0.47) | info on Rv0985c/mscL |
| Rv0613c/- | (cc=0.4674) | info on Rv0613c/- |
| Rv2669/- | (cc=0.4642) | info on Rv2669/- |
| Rv2974c/- | (cc=0.4551) | info on Rv2974c/- |
| Rv3297/nei | (cc=0.4534) | info on Rv3297/nei |
| Rv0359/- | (cc=0.438) | info on Rv0359/- |
Correlation of Rv2804c/- with Rv3297/nei
Normalized LFCs for Rv2804c/-:
(description and provenance of datasets)
| Rv2804c/- | Rv3297/nei | |
| Fe_supp_jason_reseq | -0.661 | -0.224 |
| low_pH_jason_reseq | 0.211 | -0.04 |
| NO_jason_reseq | -0.087 | -0.305 |
| B6_jason_reseq | -0.134 | -0.009 |
| MHCII_jason_reseq | 0.891 | 0.031 |
| Isoniazid02 | 0.422 | 0.16 |
| Rifampicin4 | 1.27 | 1.248 |
| Ethambutol3 | 0.158 | 1.927 |
| Meropenem3 | 0.247 | 0.707 |
| Vancomycin16 | 0.345 | 0.661 |
| Rv2680_day32 | 0.806 | 0.764 |
| H37Rv_KO_MarP | 0.435 | 0.178 |
| hypoxia_3wks | 0.064 | -0.566 |
| hypoxia_6wks | -0.113 | -0.319 |
| glycerol | 0.521 | 0.487 |
| cholesterol | 0.516 | 0.424 |
| AJ | 0.916 | -0.072 |
| Bibs02 | 0.903 | 0.787 |
| Bibs02c | 0.196 | -0.361 |
| BL6 | 0.421 | 0.25 |
| BL6a | 0.309 | -0.452 |
| BXD01 | -0.454 | -0.148 |
| BXD010 | 0.11 | -0.403 |
| BXD011 | 0.404 | -0.464 |
| BXD03 | -0.486 | 0.007 |
| BXD04 | 0.12 | -1.029 |
| BXD05 | 0.016 | 0.303 |
| BXD06 | -0.374 | -0.486 |
| BXD07 | 0.048 | -0.425 |
| BXD08 | 0.553 | -0.67 |
| BXD09 | -0.126 | -0.553 |
| CAST | 0.958 | 0.103 |
| CCcont | -0.504 | -0.031 |
| DS01 | 0.423 | 0.867 |
| DS02 | 0.561 | 1.065 |
| DS04 | 1.235 | 1.106 |
| DS0c | 1.119 | 1.398 |
| GP01 | -0.366 | -0.01 |
| GP02 | 1.241 | 1.55 |
| GP0c | 0.064 | -0.531 |
| NOD | 0.566 | 0.542 |
| NZO | 0.207 | -0.094 |
| PWK | 0.732 | -0.01 |
| H37Rv_KO_CtpC | 1.116 | -0.726 |
| H37Rv_KO_CtpD | 0.039 | -0.006 |
| H37Rv_KO_Rv1272 | -1.693 | -1.157 |
| H37Rv_KO_SugABC | 0.353 | -0.015 |
| H37Rv_KO_MbtN | -0.847 | 0.249 |
| Trans05 | -0.386 | 0.423 |
| macrophage_unactivated | -0.208 | -0.758 |
| IL1 | -0.658 | -0.187 |
| Rapamycin | -0.7 | -0.279 |
| Tcell | -0.622 | -0.714 |
| GMCSF | -0.38 | 0.092 |
| IFNab | -0.405 | -0.333 |
| IFNg | -0.77 | -0.168 |
| IFNg_GMCSF1 | 0.016 | 1.128 |
| Rv1432_day32 | -0.631 | 0.057 |
| Rv1565c_day32 | -0.52 | -1.829 |
| secA2_input | 0.307 | 0.676 |
| delta_Rv3594 | -0.216 | 0.061 |
| delta_Rv3717 | 0.301 | -0.273 |
| delta_Rv3811 | -0.082 | -0.174 |
| delta_Rv0954 | 0.886 | -0.063 |
| PonA1 | 0.293 | -0.328 |
| EccD1_KO | 0.237 | -0.322 |
| EspI_KO | 0.784 | -0.453 |
| PE35_KO | 0.254 | 0.108 |
| PPE68_KO | -0.134 | 0.749 |
| glycerol2 | 0.496 | -0.338 |
| lignocerate | 0.566 | 0.412 |
| oleate | 0.254 | -0.315 |
| phosphatidylcholine | 0.515 | 0.15 |
| acetate | 0.414 | 0.874 |
| glucAc | -0.205 | 0.642 |
| Rv0950ko | -0.552 | -0.371 |
| Rv1096ko | -0.688 | 0.175 |
| Rv3684ko | 0.151 | -0.131 |
| delta_otsA_trehalose | -0.576 | -1.502 |