Top 10 genes with highest correlation to Rv2804c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3607c/folB | (cc=0.5178) | info on Rv3607c/folB |
| Rv1646/PE17 | (cc=0.5149) | info on Rv1646/PE17 |
| Rv3026c/- | (cc=0.4881) | info on Rv3026c/- |
| Rv1163/narJ | (cc=0.4738) | info on Rv1163/narJ |
| Rv0985c/mscL | (cc=0.47) | info on Rv0985c/mscL |
| Rv0613c/- | (cc=0.4674) | info on Rv0613c/- |
| Rv2669/- | (cc=0.4642) | info on Rv2669/- |
| Rv2974c/- | (cc=0.4551) | info on Rv2974c/- |
| Rv3297/nei | (cc=0.4534) | info on Rv3297/nei |
| Rv0359/- | (cc=0.438) | info on Rv0359/- |
Correlation of Rv2804c/- with Rv3607c/folB
Normalized LFCs for Rv2804c/-:
(description and provenance of datasets)
| Rv2804c/- | Rv3607c/folB | |
| Fe_supp_jason_reseq | -0.661 | 0.35 |
| low_pH_jason_reseq | 0.211 | -0.211 |
| NO_jason_reseq | -0.087 | -0.885 |
| B6_jason_reseq | -0.134 | 1.802 |
| MHCII_jason_reseq | 0.891 | 2.507 |
| Isoniazid02 | 0.422 | -0.627 |
| Rifampicin4 | 1.27 | -0.127 |
| Ethambutol3 | 0.158 | 0.162 |
| Meropenem3 | 0.247 | -0.115 |
| Vancomycin16 | 0.345 | 0.353 |
| Rv2680_day32 | 0.806 | -0.131 |
| H37Rv_KO_MarP | 0.435 | -0.099 |
| hypoxia_3wks | 0.064 | -1.049 |
| hypoxia_6wks | -0.113 | -2.846 |
| glycerol | 0.521 | -1.596 |
| cholesterol | 0.516 | 0.03 |
| AJ | 0.916 | 2.58 |
| Bibs02 | 0.903 | 0.96 |
| Bibs02c | 0.196 | 0.171 |
| BL6 | 0.421 | -2.078 |
| BL6a | 0.309 | 0.042 |
| BXD01 | -0.454 | -0.668 |
| BXD010 | 0.11 | -2.127 |
| BXD011 | 0.404 | -1.261 |
| BXD03 | -0.486 | -2.246 |
| BXD04 | 0.12 | -1.931 |
| BXD05 | 0.016 | -2.101 |
| BXD06 | -0.374 | -1.963 |
| BXD07 | 0.048 | -2.036 |
| BXD08 | 0.553 | -2.209 |
| BXD09 | -0.126 | -2.067 |
| CAST | 0.958 | 0.642 |
| CCcont | -0.504 | -2.48 |
| DS01 | 0.423 | 2.19 |
| DS02 | 0.561 | 0.607 |
| DS04 | 1.235 | 2.171 |
| DS0c | 1.119 | 1.194 |
| GP01 | -0.366 | -1.034 |
| GP02 | 1.241 | -1.382 |
| GP0c | 0.064 | -2.16 |
| NOD | 0.566 | -0.148 |
| NZO | 0.207 | 2.128 |
| PWK | 0.732 | 1.246 |
| H37Rv_KO_CtpC | 1.116 | 0.257 |
| H37Rv_KO_CtpD | 0.039 | -2.104 |
| H37Rv_KO_Rv1272 | -1.693 | -1.745 |
| H37Rv_KO_SugABC | 0.353 | -1.297 |
| H37Rv_KO_MbtN | -0.847 | -1.609 |
| Trans05 | -0.386 | -2.17 |
| macrophage_unactivated | -0.208 | -3.156 |
| IL1 | -0.658 | -3.746 |
| Rapamycin | -0.7 | -3.876 |
| Tcell | -0.622 | -4.115 |
| GMCSF | -0.38 | -3.335 |
| IFNab | -0.405 | -3.818 |
| IFNg | -0.77 | -3.375 |
| IFNg_GMCSF1 | 0.016 | -2.445 |
| Rv1432_day32 | -0.631 | 0.0 |
| Rv1565c_day32 | -0.52 | -0.218 |
| secA2_input | 0.307 | -1.349 |
| delta_Rv3594 | -0.216 | 2.424 |
| delta_Rv3717 | 0.301 | 2.112 |
| delta_Rv3811 | -0.082 | 1.878 |
| delta_Rv0954 | 0.886 | 3.781 |
| PonA1 | 0.293 | 1.773 |
| EccD1_KO | 0.237 | 0.704 |
| EspI_KO | 0.784 | 1.831 |
| PE35_KO | 0.254 | -0.939 |
| PPE68_KO | -0.134 | -0.189 |
| glycerol2 | 0.496 | -0.39 |
| lignocerate | 0.566 | -1.308 |
| oleate | 0.254 | -0.105 |
| phosphatidylcholine | 0.515 | -0.95 |
| acetate | 0.414 | -1.127 |
| glucAc | -0.205 | -1.566 |
| Rv0950ko | -0.552 | -1.037 |
| Rv1096ko | -0.688 | -1.037 |
| Rv3684ko | 0.151 | 0.0 |
| delta_otsA_trehalose | -0.576 | -0.366 |