TnSeqCorr

Top 10 genes with highest correlation to Rv2801A/mazE9:

update plotcorrelationlink to info on gene
Rv1798/eccA5 (cc=0.4252) info on Rv1798/eccA5
Rv3645/- (cc=0.4185) info on Rv3645/-
Rv2614A/- (cc=0.415) info on Rv2614A/-
Rv3312A/- (cc=0.4091) info on Rv3312A/-
Rv1769/- (cc=0.4057) info on Rv1769/-
Rv3722c/- (cc=0.3967) info on Rv3722c/-
Rv3867/espH (cc=0.3912) info on Rv3867/espH
Rv1692/- (cc=0.3877) info on Rv1692/-
Rv0101/nrp (cc=0.3798) info on Rv0101/nrp
Rv0383c/- (cc=0.3742) info on Rv0383c/-

Correlation of Rv2801A/mazE9 with Rv3312A/-

Normalized LFCs for Rv2801A/mazE9:
(description and provenance of datasets)
Rv2801A/mazE9Rv3312A/-
Fe_supp_jason_reseq

0.463

-0.35

low_pH_jason_reseq

3.448

-0.132

NO_jason_reseq

-0.158

0.893

B6_jason_reseq

-0.343

1.266

MHCII_jason_reseq

0.888

0.295

Isoniazid02

0.356

0.941

Rifampicin4

0.287

0.742

Ethambutol3

0.376

0.548

Meropenem3

2.213

2.13

Vancomycin16

0.47

0.727

Rv2680_day32

-0.202

-0.959

H37Rv_KO_MarP

0.71

0.344

hypoxia_3wks

-0.016

-0.231

hypoxia_6wks

0.867

-0.395

glycerol

1.284

0.726

cholesterol

0.743

0.382

AJ

-0.576

0.225

Bibs02

0.205

-1.288

Bibs02c

0.299

-0.975

BL6

0.083

-0.038

BL6a

0.072

-0.436

BXD01

-0.59

0.434

BXD010

0.203

-0.436

BXD011

0.397

-0.098

BXD03

0.611

0.181

BXD04

0.124

-0.474

BXD05

0.958

0.265

BXD06

-0.151

0.331

BXD07

0.121

0.75

BXD08

-0.249

-0.034

BXD09

0.078

0.066

CAST

-0.214

-0.017

CCcont

0.519

0.157

DS01

-0.52

-0.27

DS02

0.813

0.274

DS04

-0.18

0.022

DS0c

0.13

0.064

GP01

0.589

0.31

GP02

1.215

1.1

GP0c

-0.07

0.597

NOD

-0.057

0.382

NZO

-0.231

-0.377

PWK

-0.807

-0.328

H37Rv_KO_CtpC

0.314

-0.717

H37Rv_KO_CtpD

0.401

0.144

H37Rv_KO_Rv1272

0.079

-0.912

H37Rv_KO_SugABC

-0.185

-0.312

H37Rv_KO_MbtN

-1.34

0.777

Trans05

-0.118

-0.372

macrophage_unactivated

-0.265

0.133

IL1

0.549

0.113

Rapamycin

0.767

0.292

Tcell

-0.593

0.336

GMCSF

0.594

-0.034

IFNab

0.248

-0.804

IFNg

0.706

0.551

IFNg_GMCSF1

1.263

-0.478

Rv1432_day32

0.318

0.48

Rv1565c_day32

-2.856

-3.838

secA2_input

1.063

0.243

delta_Rv3594

0.78

1.41

delta_Rv3717

0.381

1.221

delta_Rv3811

0.445

0.55

delta_Rv0954

0.681

1.469

PonA1

0.457

1.13

EccD1_KO

-0.26

-0.747

EspI_KO

-0.445

-0.374

PE35_KO

-0.254

-0.875

PPE68_KO

-0.547

-0.771

glycerol2

0.233

1.241

lignocerate

0.03

1.444

oleate

-0.366

0.771

phosphatidylcholine

-0.361

1.408

acetate

0.238

0.48

glucAc

0.484

0.764

Rv0950ko

0.546

0.519

Rv1096ko

0.814

0.452

Rv3684ko

0.18

0.252

delta_otsA_trehalose

0.609

-0.354