Top 10 genes with highest correlation to Rv2775/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1498c/- | (cc=0.6072) | info on Rv1498c/- |
| Rv2452c/- | (cc=0.5921) | info on Rv2452c/- |
| Rv2957/- | (cc=0.5567) | info on Rv2957/- |
| Rv1500/- | (cc=0.549) | info on Rv1500/- |
| Rv1583c/- | (cc=0.5471) | info on Rv1583c/- |
| Rv2267c/- | (cc=0.5409) | info on Rv2267c/- |
| Rv2881c/cdsA | (cc=0.5309) | info on Rv2881c/cdsA |
| Rv3628/ppa | (cc=0.5264) | info on Rv3628/ppa |
| Rv3429/PPE59 | (cc=0.524) | info on Rv3429/PPE59 |
| Rv1116/- | (cc=0.5156) | info on Rv1116/- |
Correlation of Rv2775/- with Rv2452c/-
Normalized LFCs for Rv2775/-:
(description and provenance of datasets)
| Rv2775/- | Rv2452c/- | |
| Fe_supp_jason_reseq | 0.466 | 0.96 |
| low_pH_jason_reseq | -0.037 | -0.964 |
| NO_jason_reseq | -0.977 | -1.313 |
| B6_jason_reseq | 0.469 | -0.583 |
| MHCII_jason_reseq | -0.364 | -0.223 |
| Isoniazid02 | -0.389 | -0.036 |
| Rifampicin4 | -0.038 | -1.719 |
| Ethambutol3 | -0.276 | 0.01 |
| Meropenem3 | -1.548 | -0.561 |
| Vancomycin16 | -0.127 | -0.738 |
| Rv2680_day32 | -0.205 | 0.925 |
| H37Rv_KO_MarP | -0.666 | -0.621 |
| hypoxia_3wks | -0.817 | 0.0 |
| hypoxia_6wks | 0.058 | -1.741 |
| glycerol | -1.814 | 0.0 |
| cholesterol | -1.544 | 0.879 |
| AJ | 0.474 | 0.336 |
| Bibs02 | -1.113 | -0.923 |
| Bibs02c | -0.1 | -0.841 |
| BL6 | 0.246 | 1.436 |
| BL6a | 0.595 | 1.722 |
| BXD01 | 0.083 | 0.958 |
| BXD010 | 1.009 | 0.495 |
| BXD011 | 0.952 | 1.58 |
| BXD03 | 0.569 | 1.511 |
| BXD04 | 0.432 | 1.075 |
| BXD05 | 2.161 | 1.515 |
| BXD06 | 1.25 | 0.742 |
| BXD07 | 0.675 | 1.6 |
| BXD08 | 0.499 | 1.268 |
| BXD09 | 0.951 | 1.494 |
| CAST | 0.592 | 0.1 |
| CCcont | 0.59 | 1.612 |
| DS01 | 0.994 | -0.277 |
| DS02 | -0.378 | -2.059 |
| DS04 | 0.037 | -0.485 |
| DS0c | -0.192 | -0.872 |
| GP01 | 1.913 | 1.026 |
| GP02 | 0.55 | 1.277 |
| GP0c | 1.296 | 1.216 |
| NOD | 1.394 | 2.039 |
| NZO | 0.162 | -1.582 |
| PWK | 1.047 | -1.294 |
| H37Rv_KO_CtpC | 0.599 | 1.687 |
| H37Rv_KO_CtpD | 1.142 | 0.874 |
| H37Rv_KO_Rv1272 | 1.787 | 1.052 |
| H37Rv_KO_SugABC | 1.287 | 0.637 |
| H37Rv_KO_MbtN | 0.538 | -0.071 |
| Trans05 | 1.467 | 1.058 |
| macrophage_unactivated | 0.524 | 0.126 |
| IL1 | -0.35 | -0.249 |
| Rapamycin | 0.964 | 0.776 |
| Tcell | -0.775 | -0.033 |
| GMCSF | 0.525 | 0.576 |
| IFNab | 0.747 | 0.181 |
| IFNg | 0.083 | -0.056 |
| IFNg_GMCSF1 | 0.019 | -0.368 |
| Rv1432_day32 | 0.113 | -0.894 |
| Rv1565c_day32 | 0.199 | 0.515 |
| secA2_input | 0.172 | -0.094 |
| delta_Rv3594 | -0.812 | -0.561 |
| delta_Rv3717 | -1.117 | -1.451 |
| delta_Rv3811 | -1.056 | -1.28 |
| delta_Rv0954 | -1.181 | -1.194 |
| PonA1 | -2.209 | -2.221 |
| EccD1_KO | 0.506 | 0.918 |
| EspI_KO | 1.269 | 1.098 |
| PE35_KO | 1.502 | 0.715 |
| PPE68_KO | 1.574 | 0.854 |
| glycerol2 | 0.0 | -0.158 |
| lignocerate | 0.935 | -0.312 |
| oleate | -1.208 | -1.089 |
| phosphatidylcholine | 0.629 | -0.048 |
| acetate | 0.469 | -0.494 |
| glucAc | 0.563 | -0.694 |
| Rv0950ko | 0.389 | -0.407 |
| Rv1096ko | 0.178 | -1.36 |
| Rv3684ko | -0.098 | 0.105 |
| delta_otsA_trehalose | -0.085 | -1.24 |